Protein–RNA interactions for Protein: Q6PKG0

LARP1, La-related protein 1, humanhuman

Known RBP Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP1Q6PKG0 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
LARP1Q6PKG0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC30.7■■■□□ 2.5
LARP1Q6PKG0 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
LARP1Q6PKG0 GRAMD4P2-201ENST00000423297 1097 ntBASIC30.69■■■□□ 2.5
LARP1Q6PKG0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC30.69■■■□□ 2.5
LARP1Q6PKG0 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
LARP1Q6PKG0 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC30.68■■■□□ 2.5
LARP1Q6PKG0 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
LARP1Q6PKG0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC30.68■■■□□ 2.5
LARP1Q6PKG0 BX842568.3-201ENST00000418104 571 ntBASIC30.68■■■□□ 2.5
LARP1Q6PKG0 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
LARP1Q6PKG0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC30.68■■■□□ 2.5
LARP1Q6PKG0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC30.68■■■□□ 2.5
LARP1Q6PKG0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
LARP1Q6PKG0 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
LARP1Q6PKG0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
LARP1Q6PKG0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
LARP1Q6PKG0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC30.67■■■□□ 2.5
LARP1Q6PKG0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
LARP1Q6PKG0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
LARP1Q6PKG0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
LARP1Q6PKG0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC30.66■■■□□ 2.5
LARP1Q6PKG0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
LARP1Q6PKG0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
LARP1Q6PKG0 MIR3181-201ENST00000578512 73 ntBASIC30.65■■■□□ 2.5
LARP1Q6PKG0 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
LARP1Q6PKG0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC30.65■■■□□ 2.5
LARP1Q6PKG0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC30.64■■■□□ 2.5
LARP1Q6PKG0 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
LARP1Q6PKG0 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
LARP1Q6PKG0 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC30.64■■■□□ 2.5
LARP1Q6PKG0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC30.64■■■□□ 2.5
LARP1Q6PKG0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC30.64■■■□□ 2.5
LARP1Q6PKG0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
LARP1Q6PKG0 DUX4L2-201ENST00000561772 1275 ntBASIC30.64■■■□□ 2.5
LARP1Q6PKG0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC30.64■■■□□ 2.5
LARP1Q6PKG0 AC241377.3-202ENST00000626088 1088 ntBASIC30.64■■■□□ 2.5
LARP1Q6PKG0 DUX4L6-201ENST00000626483 1275 ntBASIC30.64■■■□□ 2.5
LARP1Q6PKG0 DUX4L1-201ENST00000627662 1275 ntBASIC30.64■■■□□ 2.5
LARP1Q6PKG0 AC241585.3-202ENST00000628937 1088 ntBASIC30.64■■■□□ 2.5
LARP1Q6PKG0 DUX4L8-201ENST00000629013 1275 ntBASIC30.64■■■□□ 2.5
LARP1Q6PKG0 AC245100.8-202ENST00000629247 1058 ntBASIC30.64■■■□□ 2.5
LARP1Q6PKG0 DUX4L3-201ENST00000630187 1275 ntBASIC30.64■■■□□ 2.5
LARP1Q6PKG0 DUX4L7-201ENST00000630678 1275 ntBASIC30.64■■■□□ 2.5
LARP1Q6PKG0 DUX4L5-201ENST00000630834 1275 ntBASIC30.64■■■□□ 2.5
LARP1Q6PKG0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
LARP1Q6PKG0 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
LARP1Q6PKG0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC30.64■■■□□ 2.49
LARP1Q6PKG0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
LARP1Q6PKG0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC30.63■■■□□ 2.49
LARP1Q6PKG0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
LARP1Q6PKG0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC30.63■■■□□ 2.49
LARP1Q6PKG0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
LARP1Q6PKG0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC30.63■■■□□ 2.49
LARP1Q6PKG0 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
LARP1Q6PKG0 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
LARP1Q6PKG0 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
LARP1Q6PKG0 YBX1P1-201ENST00000445822 960 ntBASIC30.62■■■□□ 2.49
LARP1Q6PKG0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC30.62■■■□□ 2.49
LARP1Q6PKG0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
LARP1Q6PKG0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
LARP1Q6PKG0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC30.61■■■□□ 2.49
LARP1Q6PKG0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC30.61■■■□□ 2.49
LARP1Q6PKG0 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
LARP1Q6PKG0 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
LARP1Q6PKG0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC30.6■■■□□ 2.49
LARP1Q6PKG0 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC30.6■■■□□ 2.49
LARP1Q6PKG0 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
LARP1Q6PKG0 SLC47A1P1-202ENST00000449666 945 ntBASIC30.6■■■□□ 2.49
LARP1Q6PKG0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC30.6■■■□□ 2.49
LARP1Q6PKG0 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC30.6■■■□□ 2.49
LARP1Q6PKG0 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC30.59■■■□□ 2.49
LARP1Q6PKG0 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
LARP1Q6PKG0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
LARP1Q6PKG0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC30.59■■■□□ 2.49
LARP1Q6PKG0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC30.59■■■□□ 2.49
LARP1Q6PKG0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
LARP1Q6PKG0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC30.59■■■□□ 2.49
LARP1Q6PKG0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC30.59■■■□□ 2.49
LARP1Q6PKG0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC30.59■■■□□ 2.49
LARP1Q6PKG0 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
LARP1Q6PKG0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC30.58■■■□□ 2.49
LARP1Q6PKG0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
LARP1Q6PKG0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC30.58■■■□□ 2.49
LARP1Q6PKG0 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
LARP1Q6PKG0 AC010501.1-201ENST00000606270 1962 ntBASIC30.57■■■□□ 2.48
LARP1Q6PKG0 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
LARP1Q6PKG0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC30.57■■■□□ 2.48
LARP1Q6PKG0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
LARP1Q6PKG0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
LARP1Q6PKG0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC30.57■■■□□ 2.48
LARP1Q6PKG0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
LARP1Q6PKG0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC30.57■■■□□ 2.48
LARP1Q6PKG0 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC30.57■■■□□ 2.48
LARP1Q6PKG0 AC009086.3-201ENST00000623486 1008 ntBASIC30.57■■■□□ 2.48
LARP1Q6PKG0 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC30.57■■■□□ 2.48
LARP1Q6PKG0 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
LARP1Q6PKG0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC30.56■■■□□ 2.48
LARP1Q6PKG0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
LARP1Q6PKG0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms