Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TTC39BQ5VTQ0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TTC39BQ5VTQ0 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.8■■□□□ 1.4
TTC39BQ5VTQ0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TTC39BQ5VTQ0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TTC39BQ5VTQ0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.8■■□□□ 1.4
TTC39BQ5VTQ0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TTC39BQ5VTQ0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.8■■□□□ 1.4
TTC39BQ5VTQ0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.8■■□□□ 1.4
TTC39BQ5VTQ0 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.8■■□□□ 1.4
TTC39BQ5VTQ0 LINC00543-201ENST00000567234 1845 ntBASIC23.8■■□□□ 1.4
TTC39BQ5VTQ0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TTC39BQ5VTQ0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
TTC39BQ5VTQ0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
TTC39BQ5VTQ0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.79■■□□□ 1.4
TTC39BQ5VTQ0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TTC39BQ5VTQ0 AC010997.5-201ENST00000609182 354 ntBASIC23.79■■□□□ 1.4
TTC39BQ5VTQ0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TTC39BQ5VTQ0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.79■■□□□ 1.4
TTC39BQ5VTQ0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.79■■□□□ 1.4
TTC39BQ5VTQ0 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TTC39BQ5VTQ0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TTC39BQ5VTQ0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
TTC39BQ5VTQ0 AC004448.1-201ENST00000458332 883 ntBASIC23.78■■□□□ 1.4
TTC39BQ5VTQ0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.78■■□□□ 1.4
TTC39BQ5VTQ0 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.78■■□□□ 1.4
TTC39BQ5VTQ0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TTC39BQ5VTQ0 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
TTC39BQ5VTQ0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TTC39BQ5VTQ0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TTC39BQ5VTQ0 AL161729.1-201ENST00000604104 1402 ntBASIC23.76■■□□□ 1.39
TTC39BQ5VTQ0 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TTC39BQ5VTQ0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TTC39BQ5VTQ0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TTC39BQ5VTQ0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TTC39BQ5VTQ0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.76■■□□□ 1.39
TTC39BQ5VTQ0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TTC39BQ5VTQ0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.76■■□□□ 1.39
TTC39BQ5VTQ0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.76■■□□□ 1.39
TTC39BQ5VTQ0 MIR6722-201ENST00000617286 78 ntBASIC23.76■■□□□ 1.39
TTC39BQ5VTQ0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.76■■□□□ 1.39
TTC39BQ5VTQ0 AL022069.1-201ENST00000568025 1636 ntBASIC23.76■■□□□ 1.39
TTC39BQ5VTQ0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TTC39BQ5VTQ0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TTC39BQ5VTQ0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TTC39BQ5VTQ0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.76■■□□□ 1.39
TTC39BQ5VTQ0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TTC39BQ5VTQ0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.75■■□□□ 1.39
TTC39BQ5VTQ0 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TTC39BQ5VTQ0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.75■■□□□ 1.39
TTC39BQ5VTQ0 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.75■■□□□ 1.39
TTC39BQ5VTQ0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TTC39BQ5VTQ0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TTC39BQ5VTQ0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TTC39BQ5VTQ0 AC131274.2-201ENST00000580697 1507 ntBASIC23.74■■□□□ 1.39
TTC39BQ5VTQ0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.74■■□□□ 1.39
TTC39BQ5VTQ0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.74■■□□□ 1.39
TTC39BQ5VTQ0 AC141586.4-201ENST00000624558 1573 ntBASIC23.74■■□□□ 1.39
TTC39BQ5VTQ0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TTC39BQ5VTQ0 HLA-L-211ENST00000482052 1765 ntBASIC23.74■■□□□ 1.39
TTC39BQ5VTQ0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TTC39BQ5VTQ0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TTC39BQ5VTQ0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.74■■□□□ 1.39
TTC39BQ5VTQ0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
TTC39BQ5VTQ0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.74■■□□□ 1.39
TTC39BQ5VTQ0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.74■■□□□ 1.39
TTC39BQ5VTQ0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.73■■□□□ 1.39
TTC39BQ5VTQ0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TTC39BQ5VTQ0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TTC39BQ5VTQ0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TTC39BQ5VTQ0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.73■■□□□ 1.39
TTC39BQ5VTQ0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TTC39BQ5VTQ0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TTC39BQ5VTQ0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TTC39BQ5VTQ0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TTC39BQ5VTQ0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TTC39BQ5VTQ0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
TTC39BQ5VTQ0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.72■■□□□ 1.39
TTC39BQ5VTQ0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.72■■□□□ 1.39
TTC39BQ5VTQ0 MIR6724-1-201ENST00000616420 92 ntBASIC23.72■■□□□ 1.39
TTC39BQ5VTQ0 MIR6724-2-201ENST00000616483 92 ntBASIC23.72■■□□□ 1.39
TTC39BQ5VTQ0 MIR6724-4-201ENST00000617390 92 ntBASIC23.72■■□□□ 1.39
TTC39BQ5VTQ0 MIR6724-3-201ENST00000622482 92 ntBASIC23.72■■□□□ 1.39
TTC39BQ5VTQ0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.72■■□□□ 1.39
TTC39BQ5VTQ0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TTC39BQ5VTQ0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TTC39BQ5VTQ0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TTC39BQ5VTQ0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TTC39BQ5VTQ0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
TTC39BQ5VTQ0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
TTC39BQ5VTQ0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TTC39BQ5VTQ0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.71■■□□□ 1.39
TTC39BQ5VTQ0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TTC39BQ5VTQ0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
TTC39BQ5VTQ0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.7■■□□□ 1.39
TTC39BQ5VTQ0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.7■■□□□ 1.38
TTC39BQ5VTQ0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.7■■□□□ 1.38
TTC39BQ5VTQ0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.7■■□□□ 1.38
TTC39BQ5VTQ0 AC131212.1-201ENST00000613771 668 ntBASIC23.7■■□□□ 1.38
TTC39BQ5VTQ0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms