Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 TSPAN32-206ENST00000446063 1262 ntTSL 1 (best)14.04□□□□□ -0.162e-6■■■■□ 23.7
LSM11P83369 TSPAN32-208ENST00000461200 3325 ntTSL 213.67□□□□□ -0.222e-6■■■■□ 23.7
LSM11P83369 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.322e-6■■■■□ 23.7
LSM11P83369 TSPAN32-212ENST00000484523 582 ntTSL 512.65□□□□□ -0.382e-6■■■■□ 23.7
LSM11P83369 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC24.27■■□□□ 1.482e-12■■■■□ 23.7
LSM11P83369 GUSB-205ENST00000447929 1983 ntTSL 323.4■■□□□ 1.342e-12■■■■□ 23.7
LSM11P83369 GUSB-203ENST00000430730 1859 ntTSL 522.67■■□□□ 1.222e-12■■■■□ 23.7
LSM11P83369 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.862e-12■■■■□ 23.7
LSM11P83369 GUSB-209ENST00000466883 2555 ntTSL 214.96□□□□□ -0.012e-12■■■■□ 23.7
LSM11P83369 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.012e-6■■■■□ 23.7
LSM11P83369 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.332e-6■■■■□ 23.7
LSM11P83369 CAPN15-205ENST00000567216 3174 ntTSL 1 (best)18.9■□□□□ 0.621e-8■■■■□ 23.7
LSM11P83369 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.042e-7■■■■□ 23.7
LSM11P83369 IZUMO4-206ENST00000497445 2144 ntTSL 221.99■■□□□ 1.112e-8■■■■□ 23.7
LSM11P83369 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.12e-8■■■■□ 23.7
LSM11P83369 NOL3-213ENST00000568503 1511 ntTSL 521.89■■□□□ 1.092e-7■■■■□ 23.7
LSM11P83369 IZUMO4-204ENST00000478879 1925 ntTSL 221.53■■□□□ 1.042e-8■■■■□ 23.7
LSM11P83369 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.792e-7■■■■□ 23.7
LSM11P83369 HEXDC-215ENST00000585077 1139 ntTSL 219.92■□□□□ 0.782e-7■■■■□ 23.7
LSM11P83369 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.772e-7■■■■□ 23.7
LSM11P83369 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.752e-7■■■■□ 23.7
LSM11P83369 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.52e-8■■■■□ 23.7
LSM11P83369 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.352e-7■■■■□ 23.7
LSM11P83369 SUN1-235ENST00000497943 2824 ntTSL 216.6■□□□□ 0.259e-7■■■■□ 23.7
LSM11P83369 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.22e-7■■■■□ 23.7
LSM11P83369 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.22e-7■■■■□ 23.7
LSM11P83369 IZUMO4-211ENST00000593185 462 ntTSL 215.89■□□□□ 0.132e-8■■■■□ 23.7
LSM11P83369 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.61■□□□□ 0.092e-7■■■■□ 23.7
LSM11P83369 CIZ1-218ENST00000476727 1205 ntTSL 515.42■□□□□ 0.062e-7■■■■□ 23.7
LSM11P83369 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.36□□□□□ -0.112e-8■■■■□ 23.7
LSM11P83369 IZUMO4-212ENST00000610800 707 ntTSL 313.05□□□□□ -0.322e-8■■■■□ 23.7
LSM11P83369 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.472e-7■■■■□ 23.7
LSM11P83369 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC11.78□□□□□ -0.522e-7■■■■□ 23.7
LSM11P83369 CIZ1-228ENST00000634901 3462 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.532e-7■■■■□ 23.7
LSM11P83369 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.542e-7■■■■□ 23.7
LSM11P83369 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC10.91□□□□□ -0.662e-7■■■■□ 23.7
LSM11P83369 SUN1-213ENST00000433212 3474 ntTSL 510.88□□□□□ -0.679e-7■■■■□ 23.7
LSM11P83369 SLC50A1-204ENST00000368405 1003 ntTSL 210.83□□□□□ -0.682e-7■■■■□ 23.7
LSM11P83369 CIZ1-225ENST00000538431 2996 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.692e-7■■■■□ 23.7
LSM11P83369 CIZ1-201ENST00000277465 2742 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.692e-7■■■■□ 23.7
LSM11P83369 CIZ1-207ENST00000393608 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.72e-7■■■■□ 23.7
LSM11P83369 CIZ1-212ENST00000471773 717 ntTSL 210.5□□□□□ -0.732e-7■■■■□ 23.7
LSM11P83369 SUN1-212ENST00000429178 3701 ntTSL 1 (best)10.45□□□□□ -0.749e-7■■■■□ 23.7
LSM11P83369 SLC25A28-202ENST00000434701 1005 ntTSL 510.41□□□□□ -0.742e-7■■■■□ 23.7
LSM11P83369 SLC50A1-208ENST00000484027 596 ntTSL 310.14□□□□□ -0.792e-7■■■■□ 23.7
LSM11P83369 CIZ1-219ENST00000485001 596 ntTSL 310.13□□□□□ -0.792e-7■■■■□ 23.7
LSM11P83369 SUN1-206ENST00000413171 4488 ntTSL 510.11□□□□□ -0.799e-7■■■■□ 23.7
LSM11P83369 CIZ1-208ENST00000415526 2508 ntAPPRIS ALT2 TSL 1 (best)10.1□□□□□ -0.792e-7■■■■□ 23.7
LSM11P83369 SUN1-202ENST00000389574 3812 ntAPPRIS P3 TSL 2 BASIC9.77□□□□□ -0.859e-7■■■■□ 23.7
LSM11P83369 SUN1-205ENST00000405266 4062 ntTSL 5 BASIC9.43□□□□□ -0.99e-7■■■■□ 23.7
LSM11P83369 SUN1-210ENST00000425407 3868 ntAPPRIS P3 TSL 5 BASIC9.18□□□□□ -0.949e-7■■■■□ 23.7
LSM11P83369 CIZ1-213ENST00000471839 928 ntAPPRIS ALT2 TSL 28.96□□□□□ -0.982e-7■■■■□ 23.7
LSM11P83369 SUN1-203ENST00000401592 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.989e-7■■■■□ 23.7
LSM11P83369 SUN1-219ENST00000452783 3717 ntTSL 2 BASIC8.36□□□□□ -1.079e-7■■■■□ 23.7
LSM11P83369 SUN1-229ENST00000475971 4038 ntTSL 1 (best)8.14□□□□□ -1.119e-7■■■■□ 23.7
LSM11P83369 SLC25A28-204ENST00000496035 744 ntTSL 37.87□□□□□ -1.152e-7■■■■□ 23.7
LSM11P83369 SLC50A1-207ENST00000479579 475 ntTSL 37.37□□□□□ -1.232e-7■■■■□ 23.7
LSM11P83369 EYA3-202ENST00000373864 2459 ntTSL 5 BASIC10.41□□□□□ -0.748e-19■■■■□ 23.6
LSM11P83369 EYA3-206ENST00000471498 1806 ntTSL 1 (best)9.06□□□□□ -0.968e-19■■■■□ 23.6
LSM11P83369 EYA3-207ENST00000495923 833 ntTSL 58.22□□□□□ -1.098e-19■■■■□ 23.6
LSM11P83369 EYA3-201ENST00000373863 1729 ntTSL 1 (best) BASIC8.21□□□□□ -1.098e-19■■■■□ 23.6
LSM11P83369 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.168e-19■■■■□ 23.6
LSM11P83369 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC6.68□□□□□ -1.348e-19■■■■□ 23.6
LSM11P83369 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.364e-6■■■■□ 23.6
LSM11P83369 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC6.44□□□□□ -1.384e-6■■■■□ 23.6
LSM11P83369 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.13□□□□□ -1.434e-6■■■■□ 23.6
LSM11P83369 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC5.79□□□□□ -1.488e-19■■■■□ 23.6
LSM11P83369 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.116e-7■■■■□ 23.6
LSM11P83369 OSGEP-210ENST00000556124 1546 ntTSL 511.13□□□□□ -0.636e-7■■■■□ 23.6
LSM11P83369 OSGEP-208ENST00000555656 3258 ntTSL 27.01□□□□□ -1.296e-7■■■■□ 23.6
LSM11P83369 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.057e-7■■■■□ 23.6
LSM11P83369 MAD1L1-212ENST00000450235 850 ntTSL 314.79□□□□□ -0.047e-7■■■■□ 23.6
LSM11P83369 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.59□□□□□ -0.077e-7■■■■□ 23.6
LSM11P83369 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.227e-7■■■■□ 23.6
LSM11P83369 MAD1L1-219ENST00000481633 548 ntTSL 212.77□□□□□ -0.377e-7■■■■□ 23.6
LSM11P83369 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.47e-7■■■■□ 23.6
LSM11P83369 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.3□□□□□ -0.126e-18■■■■□ 23.6
LSM11P83369 GATD1-207ENST00000526650 457 ntTSL 314.3□□□□□ -0.126e-18■■■■□ 23.6
LSM11P83369 GATD1-204ENST00000465313 446 ntTSL 314.02□□□□□ -0.176e-18■■■■□ 23.6
LSM11P83369 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.41□□□□□ -0.266e-18■■■■□ 23.6
LSM11P83369 GATD1-208ENST00000528309 510 ntTSL 312.74□□□□□ -0.376e-18■■■■□ 23.6
LSM11P83369 GATD1-201ENST00000319863 4357 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.76e-18■■■■□ 23.6
LSM11P83369 GATD1-202ENST00000354286 3973 ntTSL 510□□□□□ -0.816e-18■■■■□ 23.6
LSM11P83369 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 08e-15■■■■□ 23.5
LSM11P83369 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC12.47□□□□□ -0.412e-10■■■■□ 23.5
LSM11P83369 AC069277.1-203ENST00000414603 517 ntTSL 38.87□□□□□ -0.992e-10■■■■□ 23.5
LSM11P83369 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.262e-7■■■■□ 23.5
LSM11P83369 KAT2A-202ENST00000465682 2990 ntTSL 511.87□□□□□ -0.512e-7■■■■□ 23.5
LSM11P83369 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.18■□□□□ 0.983e-11■■■■□ 23.4
LSM11P83369 EEF1D-217ENST00000526786 1246 ntTSL 220.3■□□□□ 0.848e-7■■■■□ 23.4
LSM11P83369 EEF1D-241ENST00000531931 614 ntTSL 320.3■□□□□ 0.848e-7■■■■□ 23.4
LSM11P83369 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.793e-11■■■■□ 23.4
LSM11P83369 EEF1D-212ENST00000525695 907 ntTSL 519.72■□□□□ 0.758e-7■■■■□ 23.4
LSM11P83369 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.733e-11■■■■□ 23.4
LSM11P83369 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.73e-11■■■■□ 23.4
LSM11P83369 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.453e-11■■■■□ 23.4
LSM11P83369 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.363e-11■■■■□ 23.4
LSM11P83369 EEF1D-235ENST00000530848 688 ntTSL 316.76■□□□□ 0.278e-7■■■■□ 23.4
LSM11P83369 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.163e-11■■■■□ 23.4
LSM11P83369 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.96■□□□□ 0.153e-11■■■■□ 23.4
Retrieved 100 of 11,495 protein–RNA pairs in 58.2 ms