Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 MAL13YGR288W 1422 nt4.33□□□□□ -1.72
CDC40P40968 MTF2YDL044C 1323 nt4.33□□□□□ -1.72
CDC40P40968 RRP45YDR280W 918 nt4.33□□□□□ -1.72
CDC40P40968 SPO74YGL170C 1242 nt4.33□□□□□ -1.72
CDC40P40968 YLR124WYLR124W 345 nt4.33□□□□□ -1.72
CDC40P40968 ZRT2YLR130C 1269 nt4.33□□□□□ -1.72
CDC40P40968 YMR295CYMR295C 594 nt4.33□□□□□ -1.72
CDC40P40968 YNL143CYNL143C 393 nt4.33□□□□□ -1.72
CDC40P40968 YPL114WYPL114W 420 nt4.33□□□□□ -1.72
CDC40P40968 PRE2YPR103W 864 nt4.33□□□□□ -1.72
CDC40P40968 RGP1YDR137W 1992 nt4.33□□□□□ -1.72
CDC40P40968 YND1YER005W 1893 nt4.32□□□□□ -1.72
CDC40P40968 SWC3YAL011W 1878 nt4.32□□□□□ -1.72
CDC40P40968 TDA11YHR159W 1515 nt4.32□□□□□ -1.72
CDC40P40968 OCT1YKL134C 2319 nt4.32□□□□□ -1.72
CDC40P40968 DEG1YFL001W 1329 nt4.32□□□□□ -1.72
CDC40P40968 COQ4YDR204W 1008 nt4.32□□□□□ -1.72
CDC40P40968 YDR274CYDR274C 372 nt4.32□□□□□ -1.72
CDC40P40968 LPP1YDR503C 825 nt4.32□□□□□ -1.72
CDC40P40968 YHR213W-AYHR213W-A 234 nt4.32□□□□□ -1.72
CDC40P40968 MRPL24YMR193W 777 nt4.32□□□□□ -1.72
CDC40P40968 JNM1YMR294W 1122 nt4.32□□□□□ -1.72
CDC40P40968 YOL079WYOL079W 399 nt4.32□□□□□ -1.72
CDC40P40968 RAD16YBR114W 2373 nt4.32□□□□□ -1.72
CDC40P40968 CTT1YGR088W 1689 nt4.32□□□□□ -1.72
CDC40P40968 CLF1YLR117C 2064 nt4.31□□□□□ -1.72
CDC40P40968 SPO77YLR341W 1434 nt4.31□□□□□ -1.72
CDC40P40968 KNH1YDL049C 807 nt4.31□□□□□ -1.72
CDC40P40968 YDL129WYDL129W 876 nt4.31□□□□□ -1.72
CDC40P40968 MTQ2YDR140W 666 nt4.31□□□□□ -1.72
CDC40P40968 YIL163CYIL163C 354 nt4.31□□□□□ -1.72
CDC40P40968 DSF1YEL070W 1509 nt4.31□□□□□ -1.72
CDC40P40968 YNR073CYNR073C 1509 nt4.31□□□□□ -1.72
CDC40P40968 HST1YOL068C 1512 nt4.31□□□□□ -1.72
CDC40P40968 CTS1YLR286C 1689 nt4.3□□□□□ -1.72
CDC40P40968 AAD4YDL243C 990 nt4.3□□□□□ -1.72
CDC40P40968 SUA5YGL169W 1281 nt4.3□□□□□ -1.72
CDC40P40968 YHL018WYHL018W 363 nt4.3□□□□□ -1.72
CDC40P40968 LEU5YHR002W 1074 nt4.3□□□□□ -1.72
CDC40P40968 CYC1YJR048W 330 nt4.3□□□□□ -1.72
CDC40P40968 CTR3YLR411W 726 nt4.3□□□□□ -1.72
CDC40P40968 UBA3YPR066W 900 nt4.3□□□□□ -1.72
CDC40P40968 YBR126W-AYBR126W-A 207 nt4.3□□□□□ -1.72
CDC40P40968 KEX1YGL203C 2190 nt4.3□□□□□ -1.72
CDC40P40968 MDL1YLR188W 2088 nt4.3□□□□□ -1.72
CDC40P40968 MUM3YOR298W 1440 nt4.29□□□□□ -1.72
CDC40P40968 VPS36YLR417W 1701 nt4.29□□□□□ -1.72
CDC40P40968 LAP3YNL239W 1365 nt4.29□□□□□ -1.72
CDC40P40968 YGR266WYGR266W 2106 nt4.29□□□□□ -1.72
CDC40P40968 RPS5YJR123W 678 nt4.29□□□□□ -1.72
CDC40P40968 XPT1YJR133W 630 nt4.29□□□□□ -1.72
CDC40P40968 NAT3YPR131C 588 nt4.29□□□□□ -1.72
CDC40P40968 STE50YCL032W 1041 nt4.29□□□□□ -1.72
CDC40P40968 ACF2YLR144C 2340 nt4.29□□□□□ -1.72
CDC40P40968 OAF1YAL051W 3144 nt4.29□□□□□ -1.72
CDC40P40968 SET4YJL105W 1683 nt4.29□□□□□ -1.72
CDC40P40968 MDM34YGL219C 1380 nt4.28□□□□□ -1.72
CDC40P40968 CUE2YKL090W 1332 nt4.28□□□□□ -1.72
CDC40P40968 MGS1YNL218W 1764 nt4.28□□□□□ -1.72
CDC40P40968 KIN28YDL108W 921 nt4.28□□□□□ -1.72
CDC40P40968 PCT1YGR202C 1275 nt4.28□□□□□ -1.72
CDC40P40968 YHR212W-AYHR212W-A 204 nt4.28□□□□□ -1.72
CDC40P40968 YAR061WYAR061W 204 nt4.28□□□□□ -1.72
CDC40P40968 YNL042W-BYNL042W-B 258 nt4.28□□□□□ -1.72
CDC40P40968 PDX3YBR035C 687 nt4.28□□□□□ -1.72
CDC40P40968 BUL1YMR275C 2931 nt4.28□□□□□ -1.72
CDC40P40968 SIF2YBR103W 1608 nt4.28□□□□□ -1.72
CDC40P40968 YGR125WYGR125W 3111 nt4.28□□□□□ -1.72
CDC40P40968 PFK1YGR240C 2964 nt4.27□□□□□ -1.73
CDC40P40968 TFC7YOR110W 1308 nt4.27□□□□□ -1.73
CDC40P40968 GSY1YFR015C 2127 nt4.27□□□□□ -1.73
CDC40P40968 FKH1YIL131C 1455 nt4.27□□□□□ -1.73
CDC40P40968 AIR2YDL175C 1035 nt4.27□□□□□ -1.73
CDC40P40968 DAS2YDR020C 699 nt4.27□□□□□ -1.73
CDC40P40968 NPY1YGL067W 1155 nt4.27□□□□□ -1.73
CDC40P40968 DSD1YGL196W 1287 nt4.27□□□□□ -1.73
CDC40P40968 VMA16YHR026W 642 nt4.27□□□□□ -1.73
CDC40P40968 APS3YJL024C 585 nt4.27□□□□□ -1.73
CDC40P40968 QRI5YLR204W 336 nt4.27□□□□□ -1.73
CDC40P40968 ISA2YPR067W 558 nt4.27□□□□□ -1.73
CDC40P40968 ATG32YIL146C 1590 nt4.27□□□□□ -1.73
CDC40P40968 POL12YBL035C 2118 nt4.27□□□□□ -1.73
CDC40P40968 GGA1YDR358W 1674 nt4.26□□□□□ -1.73
CDC40P40968 HRP1YOL123W 1605 nt4.26□□□□□ -1.73
CDC40P40968 YDL124WYDL124W 939 nt4.26□□□□□ -1.73
CDC40P40968 AUA1YFL010W-A 285 nt4.26□□□□□ -1.73
CDC40P40968 ZRT1YGL255W 1131 nt4.26□□□□□ -1.73
CDC40P40968 CIN4YMR138W 576 nt4.26□□□□□ -1.73
CDC40P40968 HLJ1YMR161W 675 nt4.26□□□□□ -1.73
CDC40P40968 YOR024WYOR024W 324 nt4.26□□□□□ -1.73
CDC40P40968 YJL206CYJL206C 2277 nt4.26□□□□□ -1.73
CDC40P40968 YMR196WYMR196W 3267 nt4.25□□□□□ -1.73
CDC40P40968 IMG2YCR071C 441 nt4.25□□□□□ -1.73
CDC40P40968 MRPL7YDR237W 879 nt4.25□□□□□ -1.73
CDC40P40968 YER085CYER085C 522 nt4.25□□□□□ -1.73
CDC40P40968 TEF4YKL081W 1239 nt4.25□□□□□ -1.73
CDC40P40968 LEM3YNL323W 1245 nt4.25□□□□□ -1.73
CDC40P40968 YPR150WYPR150W 522 nt4.25□□□□□ -1.73
CDC40P40968 YPR160C-AYPR160C-A 285 nt4.25□□□□□ -1.73
CDC40P40968 SHM1YBR263W 1473 nt4.24□□□□□ -1.73
Retrieved 100 of 7,029 protein–RNA pairs in 43.8 ms