Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 YJR012CYJR012C 624 nt5.73□□□□□ -1.49
RTR1P40084 YGP1YNL160W 1065 nt5.73□□□□□ -1.49
RTR1P40084 CPA1YOR303W 1236 nt5.73□□□□□ -1.49
RTR1P40084 AVO1YOL078W 3531 nt5.73□□□□□ -1.49
RTR1P40084 PAN1YIR006C 4443 nt5.73□□□□□ -1.49
RTR1P40084 DAL81YIR023W 2913 nt5.73□□□□□ -1.49
RTR1P40084 TSL1YML100W 3297 nt5.73□□□□□ -1.49
RTR1P40084 YMR111CYMR111C 1389 nt5.72□□□□□ -1.49
RTR1P40084 AKL1YBR059C 3327 nt5.72□□□□□ -1.49
RTR1P40084 CPR4YCR069W 957 nt5.72□□□□□ -1.49
RTR1P40084 COX17YLL009C 210 nt5.72□□□□□ -1.49
RTR1P40084 RGS2YOR107W 930 nt5.72□□□□□ -1.49
RTR1P40084 PDR15YDR406W 4590 nt5.72□□□□□ -1.49
RTR1P40084 RMA1YKL132C 1293 nt5.71□□□□□ -1.5
RTR1P40084 ACP1YKL192C 378 nt5.71□□□□□ -1.5
RTR1P40084 STE13YOR219C 2796 nt5.71□□□□□ -1.5
RTR1P40084 MPS3YJL019W 2049 nt5.7□□□□□ -1.5
RTR1P40084 DBF4YDR052C 2115 nt5.7□□□□□ -1.5
RTR1P40084 YNL108CYNL108C 813 nt5.7□□□□□ -1.5
RTR1P40084 EUG1YDR518W 1554 nt5.7□□□□□ -1.5
RTR1P40084 ZPR1YGR211W 1461 nt5.7□□□□□ -1.5
RTR1P40084 COX18YGR062C 951 nt5.69□□□□□ -1.5
RTR1P40084 CRT10YOL063C 2874 nt5.69□□□□□ -1.5
RTR1P40084 RPN6YDL097C 1305 nt5.69□□□□□ -1.5
RTR1P40084 MSC2YDR205W 2175 nt5.69□□□□□ -1.5
RTR1P40084 CEG1YGL130W 1380 nt5.68□□□□□ -1.5
RTR1P40084 HNT2YDR305C 654 nt5.68□□□□□ -1.5
RTR1P40084 YDR401WYDR401W 564 nt5.68□□□□□ -1.5
RTR1P40084 YHR214WYHR214W 612 nt5.68□□□□□ -1.5
RTR1P40084 SFK1YKL051W 1062 nt5.68□□□□□ -1.5
RTR1P40084 DBR1YKL149C 1218 nt5.68□□□□□ -1.5
RTR1P40084 YAR023CYAR023C 540 nt5.68□□□□□ -1.5
RTR1P40084 YAR066WYAR066W 612 nt5.68□□□□□ -1.5
RTR1P40084 AAP1YHR047C 2571 nt5.68□□□□□ -1.5
RTR1P40084 RRN3YKL125W 1884 nt5.68□□□□□ -1.5
RTR1P40084 VID22YLR373C 2706 nt5.68□□□□□ -1.5
RTR1P40084 EIS1YMR031C 2532 nt5.67□□□□□ -1.5
RTR1P40084 YIL165CYIL165C 360 nt5.67□□□□□ -1.5
RTR1P40084 ICY2YPL250C 411 nt5.67□□□□□ -1.5
RTR1P40084 PDB1YBR221C 1101 nt5.67□□□□□ -1.5
RTR1P40084 PHO90YJL198W 2646 nt5.67□□□□□ -1.5
RTR1P40084 RTC1YOL138C 4026 nt5.66□□□□□ -1.5
RTR1P40084 SSH4YKL124W 1740 nt5.66□□□□□ -1.5
RTR1P40084 YDR396WYDR396W 501 nt5.66□□□□□ -1.5
RTR1P40084 YER145C-AYER145C-A 438 nt5.66□□□□□ -1.5
RTR1P40084 FAF1YIL019W 1041 nt5.66□□□□□ -1.5
RTR1P40084 YAL047W-AYAL047W-A 330 nt5.66□□□□□ -1.5
RTR1P40084 SPO19YPL130W 672 nt5.66□□□□□ -1.5
RTR1P40084 YHR182WYHR182W 2358 nt5.66□□□□□ -1.5
RTR1P40084 NOP2YNL061W 1857 nt5.66□□□□□ -1.5
RTR1P40084 ERG7YHR072W 2196 nt5.66□□□□□ -1.5
RTR1P40084 FOB1YDR110W 1701 nt5.65□□□□□ -1.5
RTR1P40084 YDR545C-AYDR545C-A 480 nt5.65□□□□□ -1.5
RTR1P40084 YEL077W-AYEL077W-A 483 nt5.65□□□□□ -1.5
RTR1P40084 YER190C-BYER190C-B 483 nt5.65□□□□□ -1.5
RTR1P40084 YFL068WYFL068W 483 nt5.65□□□□□ -1.5
RTR1P40084 YGR296C-BYGR296C-B 483 nt5.65□□□□□ -1.5
RTR1P40084 YHL050W-AYHL050W-A 483 nt5.65□□□□□ -1.5
RTR1P40084 YHR219C-AYHR219C-A 483 nt5.65□□□□□ -1.5
RTR1P40084 YIL177W-AYIL177W-A 483 nt5.65□□□□□ -1.5
RTR1P40084 YJL225W-AYJL225W-A 483 nt5.65□□□□□ -1.5
RTR1P40084 LSO1YJR005C-A 282 nt5.65□□□□□ -1.5
RTR1P40084 YLL066W-AYLL066W-A 483 nt5.65□□□□□ -1.5
RTR1P40084 YLL067W-AYLL067W-A 483 nt5.65□□□□□ -1.5
RTR1P40084 YLR466C-AYLR466C-A 483 nt5.65□□□□□ -1.5
RTR1P40084 YLR467C-AYLR467C-A 483 nt5.65□□□□□ -1.5
RTR1P40084 YML133W-BYML133W-B 483 nt5.65□□□□□ -1.5
RTR1P40084 YNL339W-BYNL339W-B 483 nt5.65□□□□□ -1.5
RTR1P40084 YBL113W-AYBL113W-A 483 nt5.65□□□□□ -1.5
RTR1P40084 YOR396C-AYOR396C-A 483 nt5.65□□□□□ -1.5
RTR1P40084 YPL278CYPL278C 303 nt5.65□□□□□ -1.5
RTR1P40084 YPL283W-BYPL283W-B 483 nt5.65□□□□□ -1.5
RTR1P40084 YPR204C-AYPR204C-A 483 nt5.65□□□□□ -1.5
RTR1P40084 VPS72YDR485C 2388 nt5.65□□□□□ -1.51
RTR1P40084 HOS1YPR068C 1413 nt5.65□□□□□ -1.51
RTR1P40084 TAH18YPR048W 1872 nt5.64□□□□□ -1.51
RTR1P40084 SEC17YBL050W 879 nt5.64□□□□□ -1.51
RTR1P40084 SPS19YNL202W 879 nt5.64□□□□□ -1.51
RTR1P40084 PEP4YPL154C 1218 nt5.64□□□□□ -1.51
RTR1P40084 CCZ1YBR131W 2115 nt5.63□□□□□ -1.51
RTR1P40084 CST6YIL036W 1764 nt5.63□□□□□ -1.51
RTR1P40084 RFC2YJR068W 1062 nt5.63□□□□□ -1.51
RTR1P40084 YNK1YKL067W 462 nt5.63□□□□□ -1.51
RTR1P40084 YLR364C-AYLR364C-A 123 nt5.63□□□□□ -1.51
RTR1P40084 REI1YBR267W 1182 nt5.63□□□□□ -1.51
RTR1P40084 CAB3YKL088W 1716 nt5.62□□□□□ -1.51
RTR1P40084 SWC3YAL011W 1878 nt5.62□□□□□ -1.51
RTR1P40084 DPH6YLR143W 2058 nt5.62□□□□□ -1.51
RTR1P40084 RMR1YGL250W 726 nt5.62□□□□□ -1.51
RTR1P40084 YNL057WYNL057W 333 nt5.62□□□□□ -1.51
RTR1P40084 MRP51YPL118W 1035 nt5.62□□□□□ -1.51
RTR1P40084 YPR071WYPR071W 636 nt5.62□□□□□ -1.51
RTR1P40084 RBA50YDR527W 1320 nt5.62□□□□□ -1.51
RTR1P40084 ARO10YDR380W 1908 nt5.62□□□□□ -1.51
RTR1P40084 MET12YPL023C 1974 nt5.62□□□□□ -1.51
RTR1P40084 CRZ1YNL027W 2037 nt5.62□□□□□ -1.51
RTR1P40084 ARP1YHR129C 1155 nt5.61□□□□□ -1.51
RTR1P40084 YHR140WYHR140W 720 nt5.61□□□□□ -1.51
RTR1P40084 CAF4YKR036C 1932 nt5.61□□□□□ -1.51
RTR1P40084 BUD17YNR027W 954 nt5.61□□□□□ -1.51
Retrieved 100 of 7,029 protein–RNA pairs in 15.7 ms