Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
GDNFP39905 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GDNFP39905 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.82■□□□□ 0.76
GDNFP39905 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GDNFP39905 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GDNFP39905 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GDNFP39905 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GDNFP39905 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.82■□□□□ 0.76
GDNFP39905 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.82■□□□□ 0.76
GDNFP39905 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GDNFP39905 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.82■□□□□ 0.76
GDNFP39905 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GDNFP39905 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.81■□□□□ 0.76
GDNFP39905 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GDNFP39905 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
GDNFP39905 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.81■□□□□ 0.76
GDNFP39905 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.81■□□□□ 0.76
GDNFP39905 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GDNFP39905 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
GDNFP39905 RARRES2P2-201ENST00000394842 485 ntBASIC19.81■□□□□ 0.76
GDNFP39905 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GDNFP39905 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GDNFP39905 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GDNFP39905 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GDNFP39905 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
GDNFP39905 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
GDNFP39905 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
GDNFP39905 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
GDNFP39905 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
GDNFP39905 LINC00526-201ENST00000581067 1875 ntBASIC19.8■□□□□ 0.76
GDNFP39905 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GDNFP39905 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
GDNFP39905 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
GDNFP39905 AC026202.3-201ENST00000600805 1127 ntBASIC19.8■□□□□ 0.76
GDNFP39905 RAP2CP1-202ENST00000605179 643 ntBASIC19.8■□□□□ 0.76
GDNFP39905 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
GDNFP39905 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.8■□□□□ 0.76
GDNFP39905 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GDNFP39905 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GDNFP39905 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
GDNFP39905 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
GDNFP39905 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
GDNFP39905 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.79■□□□□ 0.76
GDNFP39905 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
GDNFP39905 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
GDNFP39905 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
GDNFP39905 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.79■□□□□ 0.76
GDNFP39905 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.79■□□□□ 0.76
GDNFP39905 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GDNFP39905 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
GDNFP39905 AC009831.1-201ENST00000580420 1582 ntBASIC19.78■□□□□ 0.76
GDNFP39905 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GDNFP39905 C1orf229-201ENST00000623686 2258 ntBASIC19.78■□□□□ 0.76
GDNFP39905 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GDNFP39905 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GDNFP39905 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
GDNFP39905 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
GDNFP39905 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GDNFP39905 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GDNFP39905 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.78■□□□□ 0.76
GDNFP39905 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.78■□□□□ 0.76
GDNFP39905 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GDNFP39905 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GDNFP39905 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
GDNFP39905 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.78■□□□□ 0.76
GDNFP39905 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
GDNFP39905 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
GDNFP39905 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
GDNFP39905 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
GDNFP39905 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GDNFP39905 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GDNFP39905 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.77■□□□□ 0.76
GDNFP39905 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.77■□□□□ 0.76
GDNFP39905 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GDNFP39905 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.77■□□□□ 0.76
GDNFP39905 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.77■□□□□ 0.76
GDNFP39905 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
GDNFP39905 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GDNFP39905 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GDNFP39905 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
GDNFP39905 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GDNFP39905 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GDNFP39905 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
GDNFP39905 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
GDNFP39905 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
GDNFP39905 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GDNFP39905 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GDNFP39905 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GDNFP39905 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GDNFP39905 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
GDNFP39905 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
GDNFP39905 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GDNFP39905 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GDNFP39905 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GDNFP39905 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
GDNFP39905 AC127496.7-201ENST00000625110 1798 ntBASIC19.75■□□□□ 0.75
GDNFP39905 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GDNFP39905 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.75■□□□□ 0.75
GDNFP39905 AC137767.1-201ENST00000602918 1920 ntBASIC19.75■□□□□ 0.75
GDNFP39905 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms