Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CHRNA1P02708 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CHRNA1P02708 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC25.17■■□□□ 1.62
CHRNA1P02708 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CHRNA1P02708 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CHRNA1P02708 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
CHRNA1P02708 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CHRNA1P02708 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CHRNA1P02708 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CHRNA1P02708 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
CHRNA1P02708 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CHRNA1P02708 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CHRNA1P02708 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
CHRNA1P02708 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.15■■□□□ 1.62
CHRNA1P02708 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.15■■□□□ 1.62
CHRNA1P02708 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.15■■□□□ 1.62
CHRNA1P02708 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CHRNA1P02708 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
CHRNA1P02708 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CHRNA1P02708 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.15■■□□□ 1.62
CHRNA1P02708 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CHRNA1P02708 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.15■■□□□ 1.62
CHRNA1P02708 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
CHRNA1P02708 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
CHRNA1P02708 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CHRNA1P02708 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC25.14■■□□□ 1.62
CHRNA1P02708 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CHRNA1P02708 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.13■■□□□ 1.61
CHRNA1P02708 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.13■■□□□ 1.61
CHRNA1P02708 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CHRNA1P02708 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC25.13■■□□□ 1.61
CHRNA1P02708 STOX2-205ENST00000513034 807 ntTSL 3 BASIC25.13■■□□□ 1.61
CHRNA1P02708 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CHRNA1P02708 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CHRNA1P02708 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHRNA1P02708 PTCHD3P2-201ENST00000424937 1205 ntBASIC25.12■■□□□ 1.61
CHRNA1P02708 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.12■■□□□ 1.61
CHRNA1P02708 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHRNA1P02708 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.12■■□□□ 1.61
CHRNA1P02708 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHRNA1P02708 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.12■■□□□ 1.61
CHRNA1P02708 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHRNA1P02708 C17orf82-201ENST00000623772 1530 ntBASIC25.12■■□□□ 1.61
CHRNA1P02708 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CHRNA1P02708 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CHRNA1P02708 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC25.11■■□□□ 1.61
CHRNA1P02708 AC091305.1-201ENST00000479476 895 ntBASIC25.11■■□□□ 1.61
CHRNA1P02708 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.11■■□□□ 1.61
CHRNA1P02708 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CHRNA1P02708 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHRNA1P02708 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
CHRNA1P02708 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHRNA1P02708 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHRNA1P02708 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHRNA1P02708 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
CHRNA1P02708 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
CHRNA1P02708 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
CHRNA1P02708 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CHRNA1P02708 RBM38-205ENST00000440234 686 ntTSL 2 BASIC25.09■■□□□ 1.61
CHRNA1P02708 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.09■■□□□ 1.61
CHRNA1P02708 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC25.09■■□□□ 1.61
CHRNA1P02708 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CHRNA1P02708 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CHRNA1P02708 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.09■■□□□ 1.61
CHRNA1P02708 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.08■■□□□ 1.61
CHRNA1P02708 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC25.08■■□□□ 1.61
CHRNA1P02708 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.08■■□□□ 1.61
CHRNA1P02708 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CHRNA1P02708 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CHRNA1P02708 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.08■■□□□ 1.61
CHRNA1P02708 AC011298.3-201ENST00000615796 283 ntBASIC25.08■■□□□ 1.61
CHRNA1P02708 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CHRNA1P02708 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHRNA1P02708 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
CHRNA1P02708 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CHRNA1P02708 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CHRNA1P02708 AL138724.1-201ENST00000606771 1088 ntBASIC25.07■■□□□ 1.6
CHRNA1P02708 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHRNA1P02708 HLA-L-211ENST00000482052 1765 ntBASIC25.07■■□□□ 1.6
CHRNA1P02708 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC25.07■■□□□ 1.6
CHRNA1P02708 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CHRNA1P02708 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.06■■□□□ 1.6
CHRNA1P02708 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
CHRNA1P02708 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CHRNA1P02708 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CHRNA1P02708 CA15P2-201ENST00000611168 834 ntBASIC25.06■■□□□ 1.6
CHRNA1P02708 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CHRNA1P02708 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
CHRNA1P02708 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CHRNA1P02708 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.06■■□□□ 1.6
CHRNA1P02708 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CHRNA1P02708 RASA4CP-201ENST00000424092 1398 ntBASIC25.05■■□□□ 1.6
CHRNA1P02708 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.05■■□□□ 1.6
CHRNA1P02708 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CHRNA1P02708 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC25.05■■□□□ 1.6
CHRNA1P02708 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.05■■□□□ 1.6
CHRNA1P02708 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CHRNA1P02708 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
CHRNA1P02708 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
CHRNA1P02708 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms