Protein–RNA interactions for Protein: O95551

TDP2, Tyrosyl-DNA phosphodiesterase 2, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2O95551 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
TDP2O95551 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC26.01■■□□□ 1.75
TDP2O95551 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
TDP2O95551 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
TDP2O95551 SHD-204ENST00000599689 1729 ntTSL 5 BASIC26■■□□□ 1.75
TDP2O95551 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC26■■□□□ 1.75
TDP2O95551 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TDP2O95551 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26■■□□□ 1.75
TDP2O95551 MIR6722-201ENST00000617286 78 ntBASIC26■■□□□ 1.75
TDP2O95551 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
TDP2O95551 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TDP2O95551 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26■■□□□ 1.75
TDP2O95551 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TDP2O95551 AC093323.1-202ENST00000635031 2045 ntBASIC25.99■■□□□ 1.75
TDP2O95551 CD72-202ENST00000378430 585 ntTSL 3 BASIC25.99■■□□□ 1.75
TDP2O95551 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
TDP2O95551 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.99■■□□□ 1.75
TDP2O95551 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
TDP2O95551 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
TDP2O95551 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TDP2O95551 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
TDP2O95551 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
TDP2O95551 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
TDP2O95551 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
TDP2O95551 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
TDP2O95551 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
TDP2O95551 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
TDP2O95551 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.98■■□□□ 1.75
TDP2O95551 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TDP2O95551 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
TDP2O95551 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TDP2O95551 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TDP2O95551 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.97■■□□□ 1.75
TDP2O95551 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TDP2O95551 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
TDP2O95551 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.97■■□□□ 1.75
TDP2O95551 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
TDP2O95551 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TDP2O95551 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TDP2O95551 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TDP2O95551 ABCB10P4-201ENST00000566803 2184 ntBASIC25.96■■□□□ 1.75
TDP2O95551 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TDP2O95551 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
TDP2O95551 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
TDP2O95551 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC25.96■■□□□ 1.75
TDP2O95551 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
TDP2O95551 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TDP2O95551 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
TDP2O95551 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
TDP2O95551 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC25.95■■□□□ 1.75
TDP2O95551 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
TDP2O95551 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.95■■□□□ 1.74
TDP2O95551 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
TDP2O95551 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
TDP2O95551 ALDH1A3-203ENST00000557963 1670 ntBASIC25.94■■□□□ 1.74
TDP2O95551 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.94■■□□□ 1.74
TDP2O95551 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
TDP2O95551 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
TDP2O95551 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.94■■□□□ 1.74
TDP2O95551 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.94■■□□□ 1.74
TDP2O95551 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.94■■□□□ 1.74
TDP2O95551 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
TDP2O95551 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
TDP2O95551 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
TDP2O95551 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
TDP2O95551 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.94■■□□□ 1.74
TDP2O95551 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.94■■□□□ 1.74
TDP2O95551 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
TDP2O95551 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
TDP2O95551 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
TDP2O95551 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
TDP2O95551 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
TDP2O95551 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
TDP2O95551 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC25.93■■□□□ 1.74
TDP2O95551 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC25.93■■□□□ 1.74
TDP2O95551 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.93■■□□□ 1.74
TDP2O95551 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
TDP2O95551 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
TDP2O95551 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
TDP2O95551 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC25.92■■□□□ 1.74
TDP2O95551 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TDP2O95551 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC25.92■■□□□ 1.74
TDP2O95551 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
TDP2O95551 MIR6724-1-201ENST00000616420 92 ntBASIC25.92■■□□□ 1.74
TDP2O95551 MIR6724-2-201ENST00000616483 92 ntBASIC25.92■■□□□ 1.74
TDP2O95551 MIR6724-4-201ENST00000617390 92 ntBASIC25.92■■□□□ 1.74
TDP2O95551 MIR6724-3-201ENST00000622482 92 ntBASIC25.92■■□□□ 1.74
TDP2O95551 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC25.92■■□□□ 1.74
TDP2O95551 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TDP2O95551 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
TDP2O95551 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TDP2O95551 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.91■■□□□ 1.74
TDP2O95551 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC25.91■■□□□ 1.74
TDP2O95551 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TDP2O95551 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
TDP2O95551 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC25.91■■□□□ 1.74
TDP2O95551 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TDP2O95551 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.91■■□□□ 1.74
TDP2O95551 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC25.91■■□□□ 1.74
TDP2O95551 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms