Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC17.74■□□□□ 0.43
PDE6DO43924 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.74■□□□□ 0.43
PDE6DO43924 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6DO43924 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC17.74■□□□□ 0.43
PDE6DO43924 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6DO43924 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.74■□□□□ 0.43
PDE6DO43924 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PDE6DO43924 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDE6DO43924 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDE6DO43924 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDE6DO43924 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PDE6DO43924 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDE6DO43924 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC17.73■□□□□ 0.43
PDE6DO43924 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDE6DO43924 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC17.73■□□□□ 0.43
PDE6DO43924 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.73■□□□□ 0.43
PDE6DO43924 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDE6DO43924 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE6DO43924 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDE6DO43924 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE6DO43924 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PDE6DO43924 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE6DO43924 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE6DO43924 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE6DO43924 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PDE6DO43924 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE6DO43924 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PDE6DO43924 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDE6DO43924 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC17.72■□□□□ 0.43
PDE6DO43924 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PDE6DO43924 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PDE6DO43924 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDE6DO43924 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC17.72■□□□□ 0.43
PDE6DO43924 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE6DO43924 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDE6DO43924 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6DO43924 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6DO43924 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6DO43924 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6DO43924 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6DO43924 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6DO43924 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6DO43924 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC17.71■□□□□ 0.43
PDE6DO43924 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6DO43924 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PDE6DO43924 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6DO43924 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC17.7■□□□□ 0.42
PDE6DO43924 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.7■□□□□ 0.42
PDE6DO43924 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6DO43924 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6DO43924 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6DO43924 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6DO43924 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6DO43924 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6DO43924 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6DO43924 AC242852.2-201ENST00000615738 1807 ntBASIC17.7■□□□□ 0.42
PDE6DO43924 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6DO43924 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
PDE6DO43924 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PDE6DO43924 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6DO43924 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6DO43924 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6DO43924 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.69■□□□□ 0.42
PDE6DO43924 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6DO43924 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6DO43924 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6DO43924 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.68■□□□□ 0.42
PDE6DO43924 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6DO43924 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6DO43924 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.68■□□□□ 0.42
PDE6DO43924 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6DO43924 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PDE6DO43924 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PDE6DO43924 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6DO43924 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6DO43924 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6DO43924 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6DO43924 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6DO43924 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PDE6DO43924 CHML-204ENST00000638121 920 ntTSL 2 BASIC17.67■□□□□ 0.42
PDE6DO43924 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PDE6DO43924 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6DO43924 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PDE6DO43924 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.66■□□□□ 0.42
PDE6DO43924 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.66■□□□□ 0.42
PDE6DO43924 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6DO43924 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6DO43924 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.66■□□□□ 0.42
PDE6DO43924 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.66■□□□□ 0.42
PDE6DO43924 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PDE6DO43924 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6DO43924 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6DO43924 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6DO43924 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6DO43924 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.66■□□□□ 0.42
PDE6DO43924 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
PDE6DO43924 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PDE6DO43924 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6DO43924 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6DO43924 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms