Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Gm28043E0CXC2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
Gm28043E0CXC2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm28043E0CXC2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm28043E0CXC2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm28043E0CXC2 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.46■□□□□ 0.87
Gm28043E0CXC2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm28043E0CXC2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.46■□□□□ 0.87
Gm28043E0CXC2 Gm43566-201ENSMUST00000196851 808 ntBASIC20.46■□□□□ 0.87
Gm28043E0CXC2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.46■□□□□ 0.87
Gm28043E0CXC2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm28043E0CXC2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm28043E0CXC2 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Gm28043E0CXC2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Gm28043E0CXC2 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Gm28043E0CXC2 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm28043E0CXC2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm28043E0CXC2 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm28043E0CXC2 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm28043E0CXC2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Gm28043E0CXC2 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm28043E0CXC2 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm28043E0CXC2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.44■□□□□ 0.86
Gm28043E0CXC2 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Gm28043E0CXC2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Gm28043E0CXC2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm28043E0CXC2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm28043E0CXC2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Gm28043E0CXC2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Gm28043E0CXC2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm28043E0CXC2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm28043E0CXC2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Gm28043E0CXC2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm28043E0CXC2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm28043E0CXC2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Gm28043E0CXC2 Gm13238-201ENSMUST00000117655 780 ntBASIC20.42■□□□□ 0.86
Gm28043E0CXC2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.41■□□□□ 0.86
Gm28043E0CXC2 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm28043E0CXC2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Gm28043E0CXC2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
Gm28043E0CXC2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm28043E0CXC2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Gm28043E0CXC2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gm28043E0CXC2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gm28043E0CXC2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Gm28043E0CXC2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gm28043E0CXC2 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Gm28043E0CXC2 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gm28043E0CXC2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm28043E0CXC2 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm28043E0CXC2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm28043E0CXC2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm28043E0CXC2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm28043E0CXC2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm28043E0CXC2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm28043E0CXC2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Gm28043E0CXC2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm28043E0CXC2 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.39■□□□□ 0.86
Gm28043E0CXC2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Gm28043E0CXC2 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Gm28043E0CXC2 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
Gm28043E0CXC2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm28043E0CXC2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Gm28043E0CXC2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.39■□□□□ 0.85
Gm28043E0CXC2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.39■□□□□ 0.85
Gm28043E0CXC2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Gm28043E0CXC2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.39■□□□□ 0.85
Gm28043E0CXC2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm28043E0CXC2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm28043E0CXC2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm28043E0CXC2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm28043E0CXC2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm28043E0CXC2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm28043E0CXC2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Gm28043E0CXC2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Gm28043E0CXC2 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm28043E0CXC2 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm28043E0CXC2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Gm28043E0CXC2 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm28043E0CXC2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gm28043E0CXC2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gm28043E0CXC2 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm28043E0CXC2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gm28043E0CXC2 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm28043E0CXC2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm28043E0CXC2 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm28043E0CXC2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm28043E0CXC2 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm28043E0CXC2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm28043E0CXC2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm28043E0CXC2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Gm28043E0CXC2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm28043E0CXC2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm28043E0CXC2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm28043E0CXC2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm28043E0CXC2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm28043E0CXC2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm28043E0CXC2 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.35■□□□□ 0.85
Gm28043E0CXC2 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm28043E0CXC2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms