Protein–RNA interactions for Protein: A6NKX1

FAM223B, Protein FAM223B, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM223BA6NKX1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FAM223BA6NKX1 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FAM223BA6NKX1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
FAM223BA6NKX1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
FAM223BA6NKX1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
FAM223BA6NKX1 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC17.81■□□□□ 0.44
FAM223BA6NKX1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
FAM223BA6NKX1 AC239859.2-201ENST00000444165 318 ntBASIC17.8■□□□□ 0.44
FAM223BA6NKX1 MIR4787-201ENST00000607364 84 ntBASIC17.8■□□□□ 0.44
FAM223BA6NKX1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FAM223BA6NKX1 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FAM223BA6NKX1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FAM223BA6NKX1 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FAM223BA6NKX1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FAM223BA6NKX1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
FAM223BA6NKX1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FAM223BA6NKX1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FAM223BA6NKX1 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
FAM223BA6NKX1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FAM223BA6NKX1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FAM223BA6NKX1 AC092028.1-203ENST00000608262 953 ntBASIC17.79■□□□□ 0.44
FAM223BA6NKX1 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
FAM223BA6NKX1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FAM223BA6NKX1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FAM223BA6NKX1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FAM223BA6NKX1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FAM223BA6NKX1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
FAM223BA6NKX1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
FAM223BA6NKX1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FAM223BA6NKX1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FAM223BA6NKX1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
FAM223BA6NKX1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
FAM223BA6NKX1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
FAM223BA6NKX1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.78■□□□□ 0.44
FAM223BA6NKX1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.78■□□□□ 0.44
FAM223BA6NKX1 MIR6722-201ENST00000617286 78 ntBASIC17.78■□□□□ 0.44
FAM223BA6NKX1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.78■□□□□ 0.44
FAM223BA6NKX1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.78■□□□□ 0.44
FAM223BA6NKX1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.78■□□□□ 0.44
FAM223BA6NKX1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.78■□□□□ 0.44
FAM223BA6NKX1 AL035685.1-201ENST00000636663 812 ntBASIC17.78■□□□□ 0.44
FAM223BA6NKX1 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FAM223BA6NKX1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
FAM223BA6NKX1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FAM223BA6NKX1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FAM223BA6NKX1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FAM223BA6NKX1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FAM223BA6NKX1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FAM223BA6NKX1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FAM223BA6NKX1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FAM223BA6NKX1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FAM223BA6NKX1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.77■□□□□ 0.44
FAM223BA6NKX1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
FAM223BA6NKX1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FAM223BA6NKX1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.77■□□□□ 0.44
FAM223BA6NKX1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.77■□□□□ 0.44
FAM223BA6NKX1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.77■□□□□ 0.44
FAM223BA6NKX1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FAM223BA6NKX1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC17.77■□□□□ 0.43
FAM223BA6NKX1 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
FAM223BA6NKX1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
FAM223BA6NKX1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
FAM223BA6NKX1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.76■□□□□ 0.43
FAM223BA6NKX1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.76■□□□□ 0.43
FAM223BA6NKX1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FAM223BA6NKX1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
FAM223BA6NKX1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FAM223BA6NKX1 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FAM223BA6NKX1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.76■□□□□ 0.43
FAM223BA6NKX1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FAM223BA6NKX1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
FAM223BA6NKX1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.76■□□□□ 0.43
FAM223BA6NKX1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FAM223BA6NKX1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
FAM223BA6NKX1 MTDHP2-201ENST00000601468 714 ntBASIC17.76■□□□□ 0.43
FAM223BA6NKX1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FAM223BA6NKX1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.76■□□□□ 0.43
FAM223BA6NKX1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
FAM223BA6NKX1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
FAM223BA6NKX1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FAM223BA6NKX1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.75■□□□□ 0.43
FAM223BA6NKX1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FAM223BA6NKX1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FAM223BA6NKX1 ABCB10P4-201ENST00000566803 2184 ntBASIC17.75■□□□□ 0.43
FAM223BA6NKX1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.75■□□□□ 0.43
FAM223BA6NKX1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FAM223BA6NKX1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.75■□□□□ 0.43
FAM223BA6NKX1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.75■□□□□ 0.43
FAM223BA6NKX1 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.75■□□□□ 0.43
FAM223BA6NKX1 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.75■□□□□ 0.43
FAM223BA6NKX1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FAM223BA6NKX1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FAM223BA6NKX1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.75■□□□□ 0.43
FAM223BA6NKX1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
FAM223BA6NKX1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FAM223BA6NKX1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.74■□□□□ 0.43
FAM223BA6NKX1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC17.74■□□□□ 0.43
FAM223BA6NKX1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FAM223BA6NKX1 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.74■□□□□ 0.43
FAM223BA6NKX1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms