Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC10.21□□□□□ -0.77
LINC00588Q9Y4M8 CSH2-202ENST00000345366 598 ntTSL 5 BASIC10.21□□□□□ -0.77
LINC00588Q9Y4M8 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
LINC00588Q9Y4M8 AK6-201ENST00000380818 1183 ntTSL 2 BASIC10.21□□□□□ -0.77
LINC00588Q9Y4M8 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC10.21□□□□□ -0.77
LINC00588Q9Y4M8 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC10.21□□□□□ -0.77
LINC00588Q9Y4M8 AC010141.1-201ENST00000411585 623 ntBASIC10.21□□□□□ -0.77
LINC00588Q9Y4M8 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC10.21□□□□□ -0.77
LINC00588Q9Y4M8 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC10.21□□□□□ -0.77
LINC00588Q9Y4M8 RNMTL1P1-201ENST00000454103 560 ntBASIC10.21□□□□□ -0.77
LINC00588Q9Y4M8 AKR7A2P1-201ENST00000460134 915 ntBASIC10.21□□□□□ -0.77
LINC00588Q9Y4M8 SCARNA20.5-201ENST00000516991 142 ntBASIC10.21□□□□□ -0.77
LINC00588Q9Y4M8 AC044849.1-201ENST00000519737 1188 ntBASIC10.21□□□□□ -0.77
LINC00588Q9Y4M8 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC10.21□□□□□ -0.77
LINC00588Q9Y4M8 DUX4L46-201ENST00000566845 751 ntBASIC10.21□□□□□ -0.77
LINC00588Q9Y4M8 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00588Q9Y4M8 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC10.21□□□□□ -0.77
LINC00588Q9Y4M8 AC009955.4-201ENST00000597192 544 ntBASIC10.21□□□□□ -0.77
LINC00588Q9Y4M8 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC10.21□□□□□ -0.77
LINC00588Q9Y4M8 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC10.21□□□□□ -0.77
LINC00588Q9Y4M8 AL139099.5-201ENST00000635274 300 ntBASIC10.21□□□□□ -0.77
LINC00588Q9Y4M8 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 AC138028.6-201ENST00000616106 1482 ntBASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 AC006058.4-201ENST00000624016 1670 ntBASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00588Q9Y4M8 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 FNTAP2-201ENST00000430308 634 ntBASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 NKAIN1P1-201ENST00000435754 582 ntBASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 EIF4HP1-201ENST00000453115 687 ntBASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 API5-203ENST00000455725 2257 ntTSL 2 BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 TUBB8P8-201ENST00000458717 1058 ntBASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 AC005740.2-201ENST00000511085 419 ntBASIC10.2□□□□□ -0.78
LINC00588Q9Y4M8 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC10.2□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms