Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 AC011495.1-201ENST00000498085 584 ntBASIC14.26□□□□□ -0.13
BRF2Q9HAW0 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 AC027307.3-201ENST00000594262 1100 ntBASIC14.26□□□□□ -0.13
BRF2Q9HAW0 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 AC090505.1-201ENST00000430515 1834 ntBASIC14.26□□□□□ -0.13
BRF2Q9HAW0 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 AC011840.2-201ENST00000563063 1520 ntBASIC14.25□□□□□ -0.13
BRF2Q9HAW0 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 AC136759.1-202ENST00000530858 2194 ntBASIC14.25□□□□□ -0.13
BRF2Q9HAW0 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 AC132938.4-201ENST00000623835 848 ntBASIC14.25□□□□□ -0.13
BRF2Q9HAW0 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.25□□□□□ -0.13
BRF2Q9HAW0 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
BRF2Q9HAW0 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 AP000593.2-201ENST00000542775 1433 ntBASIC14.24□□□□□ -0.13
BRF2Q9HAW0 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.24□□□□□ -0.13
BRF2Q9HAW0 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms