Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 KRT223P-202ENST00000449164 1292 ntBASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 AP005482.1-201ENST00000563722 1273 ntBASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 RPS24-214ENST00000613865 538 ntTSL 5 BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 MIR6775-201ENST00000617557 69 ntBASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 AC005252.3-201ENST00000623855 2258 ntBASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 ACKR1-201ENST00000368121 1240 ntBASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 C2orf27AP3-201ENST00000434123 579 ntBASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 AC004066.1-201ENST00000502488 802 ntBASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 AC106760.1-201ENST00000508690 800 ntBASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 SNX29P1-201ENST00000548357 1007 ntBASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 AP005019.2-201ENST00000615104 511 ntBASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 AL354718.3-201ENST00000616414 581 ntBASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 CR382287.1-201ENST00000623954 586 ntBASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 AL390755.1-201ENST00000623716 2027 ntBASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
PCGF1Q9BSM1 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms