Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHAMP1Q96JM3 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.33■□□□□ 0.36
CHAMP1Q96JM3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.33■□□□□ 0.36
CHAMP1Q96JM3 CNN2P2-201ENST00000443536 909 ntBASIC17.33■□□□□ 0.36
CHAMP1Q96JM3 CNN2P3-201ENST00000450201 906 ntBASIC17.33■□□□□ 0.36
CHAMP1Q96JM3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.33■□□□□ 0.36
CHAMP1Q96JM3 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CHAMP1Q96JM3 AC026410.3-201ENST00000514280 936 ntBASIC17.33■□□□□ 0.36
CHAMP1Q96JM3 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.33■□□□□ 0.36
CHAMP1Q96JM3 ZNF890P-202ENST00000530367 1156 ntBASIC17.33■□□□□ 0.36
CHAMP1Q96JM3 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.33■□□□□ 0.36
CHAMP1Q96JM3 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.33■□□□□ 0.36
CHAMP1Q96JM3 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.33■□□□□ 0.36
CHAMP1Q96JM3 AC140878.1-201ENST00000565277 250 ntBASIC17.33■□□□□ 0.36
CHAMP1Q96JM3 MIR8072-201ENST00000614241 80 ntBASIC17.33■□□□□ 0.36
CHAMP1Q96JM3 AL136317.3-201ENST00000618497 906 ntBASIC17.33■□□□□ 0.36
CHAMP1Q96JM3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
CHAMP1Q96JM3 AGAP10P-201ENST00000454844 2418 ntBASIC17.33■□□□□ 0.36
CHAMP1Q96JM3 AC027612.1-201ENST00000445234 2395 ntBASIC17.33■□□□□ 0.36
CHAMP1Q96JM3 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHAMP1Q96JM3 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHAMP1Q96JM3 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHAMP1Q96JM3 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC17.33■□□□□ 0.36
CHAMP1Q96JM3 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHAMP1Q96JM3 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CHAMP1Q96JM3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHAMP1Q96JM3 NIN-202ENST00000324330 4364 ntTSL 5 BASIC17.33■□□□□ 0.36
CHAMP1Q96JM3 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 FAM86LP-201ENST00000478302 853 ntBASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 AC023310.3-201ENST00000557027 670 ntBASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 AC100756.1-201ENST00000562736 682 ntBASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 AC138749.3-201ENST00000567691 622 ntBASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 AC116165.1-201ENST00000611806 668 ntBASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHAMP1Q96JM3 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHAMP1Q96JM3 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHAMP1Q96JM3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CHAMP1Q96JM3 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHAMP1Q96JM3 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC17.31■□□□□ 0.36
CHAMP1Q96JM3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHAMP1Q96JM3 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CHAMP1Q96JM3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHAMP1Q96JM3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHAMP1Q96JM3 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CHAMP1Q96JM3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHAMP1Q96JM3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHAMP1Q96JM3 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CHAMP1Q96JM3 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC17.31■□□□□ 0.36
CHAMP1Q96JM3 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.31■□□□□ 0.36
CHAMP1Q96JM3 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHAMP1Q96JM3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.31■□□□□ 0.36
CHAMP1Q96JM3 AC104794.3-201ENST00000566840 1248 ntBASIC17.31■□□□□ 0.36
CHAMP1Q96JM3 SPDYE22P-201ENST00000582158 798 ntBASIC17.31■□□□□ 0.36
CHAMP1Q96JM3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CHAMP1Q96JM3 AL049840.4-201ENST00000602422 811 ntBASIC17.31■□□□□ 0.36
CHAMP1Q96JM3 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.31■□□□□ 0.36
CHAMP1Q96JM3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.31■□□□□ 0.36
CHAMP1Q96JM3 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.31■□□□□ 0.36
CHAMP1Q96JM3 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.31■□□□□ 0.36
CHAMP1Q96JM3 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.31■□□□□ 0.36
CHAMP1Q96JM3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHAMP1Q96JM3 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CHAMP1Q96JM3 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms