Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 AC022137.2-201ENST00000503482 481 ntBASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 AC106760.1-201ENST00000508690 800 ntBASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 DUX4L47-201ENST00000566374 394 ntBASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 AL023775.1-201ENST00000454907 1746 ntBASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 AC055811.4-201ENST00000624039 1754 ntBASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 AC018442.1-201ENST00000421439 2061 ntBASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 ACKR1-201ENST00000368121 1240 ntBASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 NUS1P3-201ENST00000423502 862 ntBASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 ACTG1P3-201ENST00000431775 1114 ntBASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 ATP5G2P4-201ENST00000442175 420 ntBASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 AC114812.1-204ENST00000449669 728 ntBASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 AC134312.5-201ENST00000568031 1313 ntBASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SIMC1Q8NDZ2 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 AL356585.2-201ENST00000625078 2396 ntBASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms