Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC20.42■□□□□ 0.86
UBR1Q8IWV7 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
UBR1Q8IWV7 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBR1Q8IWV7 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC20.42■□□□□ 0.86
UBR1Q8IWV7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBR1Q8IWV7 AC136621.1-201ENST00000624017 2304 ntBASIC20.42■□□□□ 0.86
UBR1Q8IWV7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC20.42■□□□□ 0.86
UBR1Q8IWV7 AL157823.1-201ENST00000403727 628 ntBASIC20.41■□□□□ 0.86
UBR1Q8IWV7 LINP1-201ENST00000417112 917 ntTSL 2 BASIC20.41■□□□□ 0.86
UBR1Q8IWV7 AL080243.1-201ENST00000423293 1060 ntBASIC20.41■□□□□ 0.86
UBR1Q8IWV7 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC20.41■□□□□ 0.86
UBR1Q8IWV7 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UBR1Q8IWV7 FBXO36P1-201ENST00000579006 471 ntBASIC20.41■□□□□ 0.86
UBR1Q8IWV7 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC20.41■□□□□ 0.86
UBR1Q8IWV7 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBR1Q8IWV7 GSN-206ENST00000394353 2311 ntTSL 2 BASIC20.41■□□□□ 0.86
UBR1Q8IWV7 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
UBR1Q8IWV7 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBR1Q8IWV7 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBR1Q8IWV7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UBR1Q8IWV7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UBR1Q8IWV7 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UBR1Q8IWV7 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC20.41■□□□□ 0.86
UBR1Q8IWV7 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
UBR1Q8IWV7 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBR1Q8IWV7 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UBR1Q8IWV7 AP000354.1-201ENST00000396982 456 ntBASIC20.41■□□□□ 0.86
UBR1Q8IWV7 PGAM1P11-201ENST00000416729 680 ntBASIC20.41■□□□□ 0.86
UBR1Q8IWV7 AC136604.1-202ENST00000425471 771 ntBASIC20.41■□□□□ 0.86
UBR1Q8IWV7 AC104961.1-201ENST00000427605 771 ntBASIC20.41■□□□□ 0.86
UBR1Q8IWV7 EEF1DP5-201ENST00000431410 772 ntBASIC20.41■□□□□ 0.86
UBR1Q8IWV7 AC092903.1-201ENST00000466506 262 ntBASIC20.41■□□□□ 0.86
UBR1Q8IWV7 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC20.41■□□□□ 0.86
UBR1Q8IWV7 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC20.41■□□□□ 0.86
UBR1Q8IWV7 RN7SKP155-201ENST00000516031 288 ntBASIC20.41■□□□□ 0.86
UBR1Q8IWV7 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC20.41■□□□□ 0.86
UBR1Q8IWV7 CES1P2-201ENST00000566467 1242 ntBASIC20.41■□□□□ 0.86
UBR1Q8IWV7 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC20.41■□□□□ 0.86
UBR1Q8IWV7 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC20.41■□□□□ 0.86
UBR1Q8IWV7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBR1Q8IWV7 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC20.41■□□□□ 0.86
UBR1Q8IWV7 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC20.41■□□□□ 0.86
UBR1Q8IWV7 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBR1Q8IWV7 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
UBR1Q8IWV7 PRAL-201ENST00000624952 3286 ntBASIC20.4■□□□□ 0.86
UBR1Q8IWV7 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC20.4■□□□□ 0.86
UBR1Q8IWV7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
UBR1Q8IWV7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC20.4■□□□□ 0.86
UBR1Q8IWV7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC20.4■□□□□ 0.86
UBR1Q8IWV7 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
UBR1Q8IWV7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBR1Q8IWV7 NQO2-204ENST00000380454 851 ntTSL 2 BASIC20.4■□□□□ 0.86
UBR1Q8IWV7 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
UBR1Q8IWV7 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBR1Q8IWV7 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
UBR1Q8IWV7 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC20.4■□□□□ 0.86
UBR1Q8IWV7 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC20.4■□□□□ 0.86
UBR1Q8IWV7 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC20.4■□□□□ 0.86
UBR1Q8IWV7 AC005586.2-201ENST00000563946 837 ntBASIC20.4■□□□□ 0.86
UBR1Q8IWV7 ANKRD26P1-203ENST00000569528 966 ntBASIC20.4■□□□□ 0.86
UBR1Q8IWV7 AL009176.1-201ENST00000607876 650 ntBASIC20.4■□□□□ 0.86
UBR1Q8IWV7 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
UBR1Q8IWV7 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC20.4■□□□□ 0.86
UBR1Q8IWV7 HLA-DQB2-231ENST00000435145 2026 ntBASIC20.4■□□□□ 0.86
UBR1Q8IWV7 AC079328.2-201ENST00000561241 3354 ntBASIC20.4■□□□□ 0.86
UBR1Q8IWV7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBR1Q8IWV7 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBR1Q8IWV7 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBR1Q8IWV7 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
UBR1Q8IWV7 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC20.4■□□□□ 0.86
UBR1Q8IWV7 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBR1Q8IWV7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBR1Q8IWV7 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC20.4■□□□□ 0.86
UBR1Q8IWV7 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBR1Q8IWV7 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
UBR1Q8IWV7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
UBR1Q8IWV7 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
UBR1Q8IWV7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
UBR1Q8IWV7 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
UBR1Q8IWV7 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC20.39■□□□□ 0.86
UBR1Q8IWV7 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
UBR1Q8IWV7 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
UBR1Q8IWV7 OR7E115P-201ENST00000382617 1024 ntBASIC20.39■□□□□ 0.86
UBR1Q8IWV7 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC20.39■□□□□ 0.86
UBR1Q8IWV7 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC20.39■□□□□ 0.86
UBR1Q8IWV7 KRT18P62-201ENST00000446618 1287 ntBASIC20.39■□□□□ 0.86
UBR1Q8IWV7 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
UBR1Q8IWV7 RN7SL375P-201ENST00000492442 298 ntBASIC20.39■□□□□ 0.86
UBR1Q8IWV7 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC20.39■□□□□ 0.86
UBR1Q8IWV7 SORD2P-201ENST00000558556 1069 ntBASIC20.39■□□□□ 0.86
UBR1Q8IWV7 EMC4-208ENST00000559078 599 ntTSL 3 BASIC20.39■□□□□ 0.86
UBR1Q8IWV7 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC20.39■□□□□ 0.86
UBR1Q8IWV7 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
UBR1Q8IWV7 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
UBR1Q8IWV7 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC20.39■□□□□ 0.85
UBR1Q8IWV7 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
UBR1Q8IWV7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
UBR1Q8IWV7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
UBR1Q8IWV7 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
UBR1Q8IWV7 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms