Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.62□□□□□ -0.07
CDK3Q00526 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDK3Q00526 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDK3Q00526 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.62□□□□□ -0.07
CDK3Q00526 AC103810.3-201ENST00000583567 96 ntBASIC14.62□□□□□ -0.07
CDK3Q00526 AL451050.2-201ENST00000606967 682 ntBASIC14.62□□□□□ -0.07
CDK3Q00526 AC018529.2-202ENST00000611482 3087 ntBASIC14.62□□□□□ -0.07
CDK3Q00526 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.62□□□□□ -0.07
CDK3Q00526 AC022748.3-201ENST00000621828 275 ntBASIC14.62□□□□□ -0.07
CDK3Q00526 AC244452.3-201ENST00000636814 210 ntBASIC14.62□□□□□ -0.07
CDK3Q00526 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.62□□□□□ -0.07
CDK3Q00526 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDK3Q00526 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDK3Q00526 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CDK3Q00526 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDK3Q00526 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDK3Q00526 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CDK3Q00526 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CDK3Q00526 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.62□□□□□ -0.07
CDK3Q00526 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDK3Q00526 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDK3Q00526 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CDK3Q00526 AC244394.1-201ENST00000435000 1665 ntBASIC14.61□□□□□ -0.07
CDK3Q00526 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDK3Q00526 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDK3Q00526 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDK3Q00526 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.61□□□□□ -0.07
CDK3Q00526 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDK3Q00526 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDK3Q00526 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDK3Q00526 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.61□□□□□ -0.07
CDK3Q00526 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
CDK3Q00526 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDK3Q00526 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CDK3Q00526 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CDK3Q00526 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDK3Q00526 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDK3Q00526 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CDK3Q00526 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.61□□□□□ -0.07
CDK3Q00526 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.61□□□□□ -0.07
CDK3Q00526 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CDK3Q00526 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CDK3Q00526 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDK3Q00526 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.61□□□□□ -0.07
CDK3Q00526 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDK3Q00526 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.61□□□□□ -0.07
CDK3Q00526 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CDK3Q00526 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDK3Q00526 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CDK3Q00526 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDK3Q00526 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDK3Q00526 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDK3Q00526 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDK3Q00526 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.61□□□□□ -0.07
CDK3Q00526 AL035414.1-201ENST00000451327 857 ntBASIC14.61□□□□□ -0.07
CDK3Q00526 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.61□□□□□ -0.07
CDK3Q00526 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.61□□□□□ -0.07
CDK3Q00526 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.61□□□□□ -0.07
CDK3Q00526 AC020914.3-201ENST00000594712 304 ntBASIC14.61□□□□□ -0.07
CDK3Q00526 BNIP3P13-201ENST00000599968 566 ntBASIC14.61□□□□□ -0.07
CDK3Q00526 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CDK3Q00526 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.61□□□□□ -0.07
CDK3Q00526 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDK3Q00526 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDK3Q00526 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDK3Q00526 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDK3Q00526 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDK3Q00526 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDK3Q00526 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CDK3Q00526 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.61□□□□□ -0.07
CDK3Q00526 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.61□□□□□ -0.07
CDK3Q00526 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDK3Q00526 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.61□□□□□ -0.07
CDK3Q00526 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDK3Q00526 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDK3Q00526 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.61□□□□□ -0.07
CDK3Q00526 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDK3Q00526 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.61□□□□□ -0.07
CDK3Q00526 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CDK3Q00526 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDK3Q00526 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDK3Q00526 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDK3Q00526 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDK3Q00526 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CDK3Q00526 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDK3Q00526 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDK3Q00526 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDK3Q00526 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDK3Q00526 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.6□□□□□ -0.07
CDK3Q00526 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.6□□□□□ -0.07
CDK3Q00526 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDK3Q00526 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDK3Q00526 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDK3Q00526 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDK3Q00526 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDK3Q00526 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDK3Q00526 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDK3Q00526 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.6□□□□□ -0.07
CDK3Q00526 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.6□□□□□ -0.07
CDK3Q00526 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms