Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CXCR4P61073 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
CXCR4P61073 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CXCR4P61073 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CXCR4P61073 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.63□□□□□ -0.23
CXCR4P61073 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CXCR4P61073 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
CXCR4P61073 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CXCR4P61073 AC111170.3-201ENST00000624282 2464 ntBASIC13.63□□□□□ -0.23
CXCR4P61073 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
CXCR4P61073 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CXCR4P61073 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CXCR4P61073 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CXCR4P61073 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CXCR4P61073 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.63□□□□□ -0.23
CXCR4P61073 AC015922.1-201ENST00000421102 1152 ntBASIC13.63□□□□□ -0.23
CXCR4P61073 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.63□□□□□ -0.23
CXCR4P61073 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.63□□□□□ -0.23
CXCR4P61073 DNAJB3-201ENST00000446806 729 ntBASIC13.63□□□□□ -0.23
CXCR4P61073 SERBP1P3-201ENST00000459980 809 ntBASIC13.63□□□□□ -0.23
CXCR4P61073 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.63□□□□□ -0.23
CXCR4P61073 AC004066.1-201ENST00000502488 802 ntBASIC13.63□□□□□ -0.23
CXCR4P61073 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.63□□□□□ -0.23
CXCR4P61073 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.63□□□□□ -0.23
CXCR4P61073 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.63□□□□□ -0.23
CXCR4P61073 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.63□□□□□ -0.23
CXCR4P61073 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.63□□□□□ -0.23
CXCR4P61073 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CXCR4P61073 AC025048.3-201ENST00000590609 569 ntBASIC13.63□□□□□ -0.23
CXCR4P61073 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.63□□□□□ -0.23
CXCR4P61073 AC005702.4-201ENST00000618393 416 ntBASIC13.63□□□□□ -0.23
CXCR4P61073 AC009093.7-201ENST00000623853 1223 ntBASIC13.63□□□□□ -0.23
CXCR4P61073 LINC00628-201ENST00000628516 1289 ntBASIC13.63□□□□□ -0.23
CXCR4P61073 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.63□□□□□ -0.23
CXCR4P61073 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.63□□□□□ -0.23
CXCR4P61073 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CXCR4P61073 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CXCR4P61073 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CXCR4P61073 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CXCR4P61073 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CXCR4P61073 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CXCR4P61073 CETN4P-206ENST00000642099 2168 ntBASIC13.63□□□□□ -0.23
CXCR4P61073 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CXCR4P61073 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CXCR4P61073 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CXCR4P61073 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CXCR4P61073 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.63□□□□□ -0.23
CXCR4P61073 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.63□□□□□ -0.23
CXCR4P61073 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.63□□□□□ -0.23
CXCR4P61073 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.63□□□□□ -0.23
CXCR4P61073 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CXCR4P61073 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.63□□□□□ -0.23
CXCR4P61073 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CXCR4P61073 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.63□□□□□ -0.23
CXCR4P61073 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.63□□□□□ -0.23
CXCR4P61073 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.63□□□□□ -0.23
CXCR4P61073 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CXCR4P61073 AC138969.2-201ENST00000532739 9932 ntBASIC13.63□□□□□ -0.23
CXCR4P61073 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CXCR4P61073 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CXCR4P61073 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.63□□□□□ -0.23
CXCR4P61073 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.62□□□□□ -0.23
CXCR4P61073 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
CXCR4P61073 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CXCR4P61073 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.62□□□□□ -0.23
CXCR4P61073 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCR4P61073 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CXCR4P61073 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCR4P61073 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCR4P61073 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.62□□□□□ -0.23
CXCR4P61073 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCR4P61073 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.62□□□□□ -0.23
CXCR4P61073 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCR4P61073 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCR4P61073 AL157414.3-201ENST00000624276 1954 ntBASIC13.62□□□□□ -0.23
CXCR4P61073 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCR4P61073 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CXCR4P61073 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCR4P61073 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CXCR4P61073 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.62□□□□□ -0.23
CXCR4P61073 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.62□□□□□ -0.23
CXCR4P61073 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.62□□□□□ -0.23
CXCR4P61073 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCR4P61073 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCR4P61073 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCR4P61073 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.62□□□□□ -0.23
CXCR4P61073 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCR4P61073 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.62□□□□□ -0.23
CXCR4P61073 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CXCR4P61073 AL022342.1-201ENST00000400363 863 ntBASIC13.62□□□□□ -0.23
CXCR4P61073 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.62□□□□□ -0.23
CXCR4P61073 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CXCR4P61073 TOMM22P5-201ENST00000416399 439 ntBASIC13.62□□□□□ -0.23
CXCR4P61073 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.62□□□□□ -0.23
CXCR4P61073 YBX1P5-201ENST00000509441 847 ntBASIC13.62□□□□□ -0.23
CXCR4P61073 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.62□□□□□ -0.23
CXCR4P61073 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.62□□□□□ -0.23
CXCR4P61073 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CXCR4P61073 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCR4P61073 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms