Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNCAP37840 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SNCAP37840 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNCAP37840 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SNCAP37840 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
SNCAP37840 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.37□□□□□ -0.43
SNCAP37840 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNCAP37840 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNCAP37840 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNCAP37840 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNCAP37840 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SNCAP37840 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNCAP37840 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SNCAP37840 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
SNCAP37840 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
SNCAP37840 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNCAP37840 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.37□□□□□ -0.43
SNCAP37840 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC12.37□□□□□ -0.43
SNCAP37840 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SNCAP37840 SERBP1P3-201ENST00000459980 809 ntBASIC12.37□□□□□ -0.43
SNCAP37840 ALG1L5P-201ENST00000482043 771 ntBASIC12.37□□□□□ -0.43
SNCAP37840 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.37□□□□□ -0.43
SNCAP37840 PUS1-205ENST00000535067 838 ntTSL 3 BASIC12.37□□□□□ -0.43
SNCAP37840 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.37□□□□□ -0.43
SNCAP37840 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.37□□□□□ -0.43
SNCAP37840 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.37□□□□□ -0.43
SNCAP37840 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.37□□□□□ -0.43
SNCAP37840 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
SNCAP37840 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
SNCAP37840 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNCAP37840 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SNCAP37840 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNCAP37840 KRT8P12-202ENST00000472924 1397 ntBASIC12.37□□□□□ -0.43
SNCAP37840 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.37□□□□□ -0.43
SNCAP37840 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNCAP37840 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNCAP37840 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNCAP37840 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.37□□□□□ -0.43
SNCAP37840 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.37□□□□□ -0.43
SNCAP37840 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SNCAP37840 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SNCAP37840 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
SNCAP37840 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.37□□□□□ -0.43
SNCAP37840 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.37□□□□□ -0.43
SNCAP37840 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
SNCAP37840 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.37□□□□□ -0.43
SNCAP37840 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.37□□□□□ -0.43
SNCAP37840 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNCAP37840 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNCAP37840 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SNCAP37840 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SNCAP37840 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
SNCAP37840 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
SNCAP37840 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.36□□□□□ -0.43
SNCAP37840 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCAP37840 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.36□□□□□ -0.43
SNCAP37840 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SNCAP37840 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.36□□□□□ -0.43
SNCAP37840 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SNCAP37840 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.36□□□□□ -0.43
SNCAP37840 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.36□□□□□ -0.43
SNCAP37840 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SNCAP37840 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SNCAP37840 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCAP37840 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.36□□□□□ -0.43
SNCAP37840 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SNCAP37840 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
SNCAP37840 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.36□□□□□ -0.43
SNCAP37840 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SNCAP37840 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCAP37840 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCAP37840 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCAP37840 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCAP37840 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCAP37840 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SNCAP37840 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCAP37840 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCAP37840 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCAP37840 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SNCAP37840 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.36□□□□□ -0.43
SNCAP37840 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.36□□□□□ -0.43
SNCAP37840 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC12.36□□□□□ -0.43
SNCAP37840 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SNCAP37840 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC12.36□□□□□ -0.43
SNCAP37840 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.36□□□□□ -0.43
SNCAP37840 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.36□□□□□ -0.43
SNCAP37840 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCAP37840 PGAM5P1-201ENST00000518923 814 ntBASIC12.36□□□□□ -0.43
SNCAP37840 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.36□□□□□ -0.43
SNCAP37840 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.36□□□□□ -0.43
SNCAP37840 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.36□□□□□ -0.43
SNCAP37840 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.36□□□□□ -0.43
SNCAP37840 MIR3687-2-201ENST00000577708 61 ntBASIC12.36□□□□□ -0.43
SNCAP37840 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC12.36□□□□□ -0.43
SNCAP37840 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.36□□□□□ -0.43
SNCAP37840 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.36□□□□□ -0.43
SNCAP37840 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.36□□□□□ -0.43
SNCAP37840 MIR3687-1-201ENST00000614492 61 ntBASIC12.36□□□□□ -0.43
SNCAP37840 AC007967.4-201ENST00000614700 386 ntBASIC12.36□□□□□ -0.43
SNCAP37840 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms