Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH3P22223 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.74□□□□□ -0.05
CDH3P22223 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH3P22223 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.74□□□□□ -0.05
CDH3P22223 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.74□□□□□ -0.05
CDH3P22223 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.74□□□□□ -0.05
CDH3P22223 AC145423.3-201ENST00000615987 467 ntBASIC14.74□□□□□ -0.05
CDH3P22223 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH3P22223 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH3P22223 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH3P22223 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH3P22223 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH3P22223 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH3P22223 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.74□□□□□ -0.05
CDH3P22223 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH3P22223 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH3P22223 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH3P22223 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.74□□□□□ -0.05
CDH3P22223 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH3P22223 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
CDH3P22223 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH3P22223 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.74□□□□□ -0.05
CDH3P22223 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH3P22223 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH3P22223 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH3P22223 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH3P22223 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH3P22223 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH3P22223 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH3P22223 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH3P22223 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDH3P22223 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH3P22223 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CDH3P22223 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
CDH3P22223 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH3P22223 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CDH3P22223 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH3P22223 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDH3P22223 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH3P22223 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH3P22223 CICP11-201ENST00000434745 2827 ntBASIC14.73□□□□□ -0.05
CDH3P22223 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH3P22223 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH3P22223 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH3P22223 ANKRD19P-201ENST00000338192 862 ntBASIC14.73□□□□□ -0.05
CDH3P22223 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDH3P22223 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH3P22223 ACTBP8-201ENST00000403258 1108 ntBASIC14.73□□□□□ -0.05
CDH3P22223 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.73□□□□□ -0.05
CDH3P22223 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.73□□□□□ -0.05
CDH3P22223 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH3P22223 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.73□□□□□ -0.05
CDH3P22223 RPL7P3-201ENST00000441388 714 ntBASIC14.73□□□□□ -0.05
CDH3P22223 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.73□□□□□ -0.05
CDH3P22223 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.73□□□□□ -0.05
CDH3P22223 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CDH3P22223 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDH3P22223 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.73□□□□□ -0.05
CDH3P22223 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.73□□□□□ -0.05
CDH3P22223 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH3P22223 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH3P22223 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.73□□□□□ -0.05
CDH3P22223 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.73□□□□□ -0.05
CDH3P22223 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH3P22223 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CDH3P22223 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.73□□□□□ -0.05
CDH3P22223 AC244669.2-201ENST00000612320 853 ntBASIC14.73□□□□□ -0.05
CDH3P22223 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH3P22223 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH3P22223 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
CDH3P22223 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH3P22223 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH3P22223 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.73□□□□□ -0.05
CDH3P22223 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH3P22223 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH3P22223 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH3P22223 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
CDH3P22223 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDH3P22223 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH3P22223 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH3P22223 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH3P22223 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH3P22223 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDH3P22223 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH3P22223 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH3P22223 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDH3P22223 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CDH3P22223 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH3P22223 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.72□□□□□ -0.05
CDH3P22223 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CDH3P22223 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.72□□□□□ -0.05
CDH3P22223 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CDH3P22223 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH3P22223 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH3P22223 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
CDH3P22223 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH3P22223 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CDH3P22223 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH3P22223 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
CDH3P22223 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms