Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.1■□□□□ 0.01
VCLP18206 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VCLP18206 BAATP1-201ENST00000412284 1225 ntBASIC15.1■□□□□ 0.01
VCLP18206 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VCLP18206 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.1■□□□□ 0.01
VCLP18206 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.1■□□□□ 0.01
VCLP18206 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.1■□□□□ 0.01
VCLP18206 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VCLP18206 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.1■□□□□ 0.01
VCLP18206 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VCLP18206 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.1■□□□□ 0.01
VCLP18206 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.1■□□□□ 0.01
VCLP18206 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VCLP18206 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.1■□□□□ 0.01
VCLP18206 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.1■□□□□ 0.01
VCLP18206 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.1■□□□□ 0.01
VCLP18206 AC106886.1-201ENST00000568660 600 ntBASIC15.1■□□□□ 0.01
VCLP18206 SAMD11P1-201ENST00000571429 661 ntBASIC15.1■□□□□ 0.01
VCLP18206 CLUHP6-201ENST00000580789 941 ntBASIC15.1■□□□□ 0.01
VCLP18206 AC008735.3-201ENST00000596646 500 ntBASIC15.1■□□□□ 0.01
VCLP18206 AC233724.13-201ENST00000598383 410 ntBASIC15.1■□□□□ 0.01
VCLP18206 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.1■□□□□ 0.01
VCLP18206 AL162274.1-201ENST00000617191 1098 ntBASIC15.1■□□□□ 0.01
VCLP18206 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VCLP18206 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.1■□□□□ 0.01
VCLP18206 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
VCLP18206 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VCLP18206 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VCLP18206 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
VCLP18206 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VCLP18206 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VCLP18206 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
VCLP18206 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
VCLP18206 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VCLP18206 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VCLP18206 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VCLP18206 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
VCLP18206 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.1■□□□□ 0.01
VCLP18206 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VCLP18206 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VCLP18206 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VCLP18206 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
VCLP18206 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VCLP18206 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VCLP18206 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
VCLP18206 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
VCLP18206 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VCLP18206 AC027601.5-201ENST00000624065 2482 ntBASIC15.09■□□□□ 0.01
VCLP18206 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
VCLP18206 SBF1P1-201ENST00000444527 5631 ntBASIC15.09■□□□□ 0.01
VCLP18206 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
VCLP18206 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
VCLP18206 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VCLP18206 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.09■□□□□ 0.01
VCLP18206 AC012508.2-201ENST00000567613 1472 ntBASIC15.09■□□□□ 0.01
VCLP18206 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.09■□□□□ 0.01
VCLP18206 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VCLP18206 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VCLP18206 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
VCLP18206 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.09■□□□□ 0.01
VCLP18206 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.09■□□□□ 0.01
VCLP18206 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
VCLP18206 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
VCLP18206 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.09■□□□□ 0.01
VCLP18206 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.09■□□□□ 0.01
VCLP18206 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.09■□□□□ 0.01
VCLP18206 AC114812.1-204ENST00000449669 728 ntBASIC15.09■□□□□ 0.01
VCLP18206 AC093433.1-201ENST00000458048 571 ntBASIC15.09■□□□□ 0.01
VCLP18206 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.09■□□□□ 0.01
VCLP18206 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.09■□□□□ 0.01
VCLP18206 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.09■□□□□ 0.01
VCLP18206 BTNL10-201ENST00000595971 695 ntBASIC15.09■□□□□ 0.01
VCLP18206 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
VCLP18206 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.09■□□□□ 0.01
VCLP18206 AL928921.2-201ENST00000641325 2442 ntBASIC15.09■□□□□ 0.01
VCLP18206 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VCLP18206 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
VCLP18206 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
VCLP18206 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.09■□□□□ 0.01
VCLP18206 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
VCLP18206 AC134312.5-201ENST00000568031 1313 ntBASIC15.09■□□□□ 0.01
VCLP18206 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
VCLP18206 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VCLP18206 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VCLP18206 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
VCLP18206 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
VCLP18206 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
VCLP18206 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
VCLP18206 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.09■□□□□ 0.01
VCLP18206 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VCLP18206 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VCLP18206 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
VCLP18206 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.09■□□□□ 0.01
VCLP18206 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
VCLP18206 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.09■□□□□ 0.01
VCLP18206 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VCLP18206 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.09■□□□□ 0.01
VCLP18206 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.08■□□□□ 0.01
VCLP18206 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
VCLP18206 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms