Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH1P12830 CU639417.3-201ENST00000624240 1404 ntBASIC14.61□□□□□ -0.07
CDH1P12830 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CDH1P12830 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH1P12830 AC055811.4-201ENST00000624039 1754 ntBASIC14.61□□□□□ -0.07
CDH1P12830 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH1P12830 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH1P12830 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH1P12830 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH1P12830 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH1P12830 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CDH1P12830 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH1P12830 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH1P12830 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.61□□□□□ -0.07
CDH1P12830 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH1P12830 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CDH1P12830 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
CDH1P12830 COX5BP8-201ENST00000416911 349 ntBASIC14.61□□□□□ -0.07
CDH1P12830 EIF3FP3-201ENST00000434851 1086 ntBASIC14.61□□□□□ -0.07
CDH1P12830 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH1P12830 AC012441.1-201ENST00000446669 685 ntBASIC14.61□□□□□ -0.07
CDH1P12830 AC007389.4-201ENST00000454674 793 ntBASIC14.61□□□□□ -0.07
CDH1P12830 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
CDH1P12830 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CDH1P12830 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH1P12830 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CDH1P12830 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.61□□□□□ -0.07
CDH1P12830 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH1P12830 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH1P12830 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH1P12830 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH1P12830 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH1P12830 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH1P12830 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH1P12830 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CDH1P12830 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH1P12830 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH1P12830 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CDH1P12830 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH1P12830 AC107918.4-201ENST00000641966 3141 ntBASIC14.61□□□□□ -0.07
CDH1P12830 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH1P12830 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH1P12830 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH1P12830 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH1P12830 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH1P12830 AC113367.3-201ENST00000508316 1912 ntBASIC14.6□□□□□ -0.07
CDH1P12830 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.6□□□□□ -0.07
CDH1P12830 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDH1P12830 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH1P12830 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH1P12830 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH1P12830 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH1P12830 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.6□□□□□ -0.07
CDH1P12830 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH1P12830 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
CDH1P12830 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH1P12830 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.6□□□□□ -0.07
CDH1P12830 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH1P12830 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.6□□□□□ -0.07
CDH1P12830 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.6□□□□□ -0.07
CDH1P12830 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CDH1P12830 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
CDH1P12830 TMEM14DP-201ENST00000422205 345 ntBASIC14.6□□□□□ -0.07
CDH1P12830 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.6□□□□□ -0.07
CDH1P12830 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.6□□□□□ -0.07
CDH1P12830 TTTY23B-201ENST00000442790 549 ntBASIC14.6□□□□□ -0.07
CDH1P12830 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.6□□□□□ -0.07
CDH1P12830 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.6□□□□□ -0.07
CDH1P12830 DUX4L47-201ENST00000566374 394 ntBASIC14.6□□□□□ -0.07
CDH1P12830 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.6□□□□□ -0.07
CDH1P12830 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDH1P12830 IGHV3-72-202ENST00000621503 303 ntBASIC14.6□□□□□ -0.07
CDH1P12830 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDH1P12830 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CDH1P12830 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
CDH1P12830 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH1P12830 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.6□□□□□ -0.07
CDH1P12830 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.6□□□□□ -0.07
CDH1P12830 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH1P12830 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH1P12830 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.6□□□□□ -0.07
CDH1P12830 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH1P12830 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.6□□□□□ -0.07
CDH1P12830 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CDH1P12830 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH1P12830 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH1P12830 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
CDH1P12830 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH1P12830 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CDH1P12830 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH1P12830 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH1P12830 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH1P12830 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
CDH1P12830 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH1P12830 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH1P12830 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDH1P12830 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.59□□□□□ -0.07
CDH1P12830 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDH1P12830 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
CDH1P12830 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms