Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN1P07384 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.78□□□□□ -0.04
CAPN1P07384 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN1P07384 ANKRD19P-201ENST00000338192 862 ntBASIC14.78□□□□□ -0.04
CAPN1P07384 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.78□□□□□ -0.04
CAPN1P07384 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CAPN1P07384 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN1P07384 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.78□□□□□ -0.04
CAPN1P07384 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.78□□□□□ -0.04
CAPN1P07384 AC134915.1-201ENST00000426461 574 ntBASIC14.78□□□□□ -0.04
CAPN1P07384 RPS2P32-201ENST00000439199 892 ntBASIC14.78□□□□□ -0.04
CAPN1P07384 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CAPN1P07384 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.78□□□□□ -0.04
CAPN1P07384 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.78□□□□□ -0.04
CAPN1P07384 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN1P07384 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.78□□□□□ -0.04
CAPN1P07384 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.78□□□□□ -0.04
CAPN1P07384 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.78□□□□□ -0.04
CAPN1P07384 GAPDHP40-201ENST00000505218 1006 ntBASIC14.78□□□□□ -0.04
CAPN1P07384 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CAPN1P07384 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.78□□□□□ -0.04
CAPN1P07384 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.78□□□□□ -0.04
CAPN1P07384 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.78□□□□□ -0.04
CAPN1P07384 MIR5189-201ENST00000577370 114 ntBASIC14.78□□□□□ -0.04
CAPN1P07384 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CAPN1P07384 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CAPN1P07384 MIR6775-201ENST00000617557 69 ntBASIC14.78□□□□□ -0.04
CAPN1P07384 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN1P07384 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN1P07384 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.78□□□□□ -0.04
CAPN1P07384 INTS4P2-202ENST00000614726 2019 ntBASIC14.78□□□□□ -0.04
CAPN1P07384 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CAPN1P07384 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CAPN1P07384 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN1P07384 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN1P07384 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN1P07384 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN1P07384 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CAPN1P07384 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.78□□□□□ -0.04
CAPN1P07384 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
CAPN1P07384 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
CAPN1P07384 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.77□□□□□ -0.04
CAPN1P07384 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CAPN1P07384 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.77□□□□□ -0.04
CAPN1P07384 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CAPN1P07384 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CAPN1P07384 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CAPN1P07384 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CAPN1P07384 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CAPN1P07384 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CAPN1P07384 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CAPN1P07384 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
CAPN1P07384 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.77□□□□□ -0.04
CAPN1P07384 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CAPN1P07384 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CAPN1P07384 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CAPN1P07384 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CAPN1P07384 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CAPN1P07384 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.77□□□□□ -0.05
CAPN1P07384 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.77□□□□□ -0.05
CAPN1P07384 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CAPN1P07384 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.77□□□□□ -0.05
CAPN1P07384 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CAPN1P07384 SLC25A47P1-201ENST00000531577 414 ntBASIC14.77□□□□□ -0.05
CAPN1P07384 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.77□□□□□ -0.05
CAPN1P07384 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.77□□□□□ -0.05
CAPN1P07384 ENPP7P5-201ENST00000541031 1031 ntBASIC14.77□□□□□ -0.05
CAPN1P07384 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.77□□□□□ -0.05
CAPN1P07384 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CAPN1P07384 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.77□□□□□ -0.05
CAPN1P07384 AC233724.13-201ENST00000598383 410 ntBASIC14.77□□□□□ -0.05
CAPN1P07384 AL049840.4-201ENST00000602422 811 ntBASIC14.77□□□□□ -0.05
CAPN1P07384 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.77□□□□□ -0.05
CAPN1P07384 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.77□□□□□ -0.05
CAPN1P07384 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.77□□□□□ -0.05
CAPN1P07384 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.77□□□□□ -0.05
CAPN1P07384 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CAPN1P07384 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.77□□□□□ -0.05
CAPN1P07384 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CAPN1P07384 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CAPN1P07384 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CAPN1P07384 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CAPN1P07384 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.77□□□□□ -0.05
CAPN1P07384 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.77□□□□□ -0.05
CAPN1P07384 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.77□□□□□ -0.05
CAPN1P07384 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CAPN1P07384 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CAPN1P07384 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CAPN1P07384 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CAPN1P07384 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CAPN1P07384 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CAPN1P07384 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CAPN1P07384 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CAPN1P07384 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CAPN1P07384 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CAPN1P07384 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CAPN1P07384 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.77□□□□□ -0.05
CAPN1P07384 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.77□□□□□ -0.05
CAPN1P07384 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CAPN1P07384 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms