Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
RAPGEF3O95398 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RAPGEF3O95398 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC21.72■■□□□ 1.07
RAPGEF3O95398 AC104961.1-201ENST00000427605 771 ntBASIC21.72■■□□□ 1.07
RAPGEF3O95398 ASS1P2-201ENST00000439895 1223 ntBASIC21.72■■□□□ 1.07
RAPGEF3O95398 AC027612.2-202ENST00000445955 1199 ntBASIC21.72■■□□□ 1.07
RAPGEF3O95398 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC21.72■■□□□ 1.07
RAPGEF3O95398 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAPGEF3O95398 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC21.72■■□□□ 1.07
RAPGEF3O95398 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC21.72■■□□□ 1.07
RAPGEF3O95398 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC21.72■■□□□ 1.07
RAPGEF3O95398 SNORD3B-1-201ENST00000577988 758 ntBASIC21.72■■□□□ 1.07
RAPGEF3O95398 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC21.72■■□□□ 1.07
RAPGEF3O95398 AL021707.6-201ENST00000609212 491 ntBASIC21.72■■□□□ 1.07
RAPGEF3O95398 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC21.72■■□□□ 1.07
RAPGEF3O95398 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RAPGEF3O95398 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC21.72■■□□□ 1.07
RAPGEF3O95398 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC21.72■■□□□ 1.07
RAPGEF3O95398 LINC01101-201ENST00000622953 1884 ntBASIC21.72■■□□□ 1.07
RAPGEF3O95398 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAPGEF3O95398 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC21.72■■□□□ 1.07
RAPGEF3O95398 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
RAPGEF3O95398 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAPGEF3O95398 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAPGEF3O95398 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC21.71■■□□□ 1.07
RAPGEF3O95398 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAPGEF3O95398 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAPGEF3O95398 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAPGEF3O95398 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAPGEF3O95398 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RAPGEF3O95398 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
RAPGEF3O95398 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC21.71■■□□□ 1.07
RAPGEF3O95398 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAPGEF3O95398 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAPGEF3O95398 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RAPGEF3O95398 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RAPGEF3O95398 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
RAPGEF3O95398 AP000354.1-201ENST00000396982 456 ntBASIC21.71■■□□□ 1.07
RAPGEF3O95398 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RAPGEF3O95398 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC21.71■■□□□ 1.07
RAPGEF3O95398 OR52M2P-201ENST00000414298 959 ntBASIC21.71■■□□□ 1.07
RAPGEF3O95398 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC21.71■■□□□ 1.07
RAPGEF3O95398 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC21.71■■□□□ 1.07
RAPGEF3O95398 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC21.71■■□□□ 1.07
RAPGEF3O95398 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC21.71■■□□□ 1.07
RAPGEF3O95398 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
RAPGEF3O95398 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
RAPGEF3O95398 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RAPGEF3O95398 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC21.71■■□□□ 1.07
RAPGEF3O95398 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RAPGEF3O95398 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAPGEF3O95398 AC019109.1-201ENST00000401725 1874 ntBASIC21.71■■□□□ 1.07
RAPGEF3O95398 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC21.71■■□□□ 1.07
RAPGEF3O95398 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAPGEF3O95398 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
RAPGEF3O95398 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.07
RAPGEF3O95398 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC21.7■■□□□ 1.07
RAPGEF3O95398 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAPGEF3O95398 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
RAPGEF3O95398 AC008536.3-201ENST00000623282 1599 ntBASIC21.7■■□□□ 1.06
RAPGEF3O95398 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RAPGEF3O95398 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAPGEF3O95398 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAPGEF3O95398 BID-213ENST00000615414 2236 ntTSL 5 BASIC21.7■■□□□ 1.06
RAPGEF3O95398 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC21.7■■□□□ 1.06
RAPGEF3O95398 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RAPGEF3O95398 HIST1H2APS2-201ENST00000454426 370 ntBASIC21.7■■□□□ 1.06
RAPGEF3O95398 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC21.7■■□□□ 1.06
RAPGEF3O95398 RN7SL147P-201ENST00000487345 298 ntBASIC21.7■■□□□ 1.06
RAPGEF3O95398 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC21.7■■□□□ 1.06
RAPGEF3O95398 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAPGEF3O95398 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC21.7■■□□□ 1.06
RAPGEF3O95398 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC21.7■■□□□ 1.06
RAPGEF3O95398 AC091769.1-201ENST00000619576 568 ntBASIC21.7■■□□□ 1.06
RAPGEF3O95398 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAPGEF3O95398 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC21.7■■□□□ 1.06
RAPGEF3O95398 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC21.7■■□□□ 1.06
RAPGEF3O95398 AC092135.3-201ENST00000624151 1846 ntBASIC21.7■■□□□ 1.06
RAPGEF3O95398 AC087481.3-201ENST00000602886 1894 ntBASIC21.7■■□□□ 1.06
RAPGEF3O95398 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAPGEF3O95398 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAPGEF3O95398 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC21.7■■□□□ 1.06
RAPGEF3O95398 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAPGEF3O95398 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC21.7■■□□□ 1.06
RAPGEF3O95398 FKBP4P8-201ENST00000610931 1369 ntBASIC21.7■■□□□ 1.06
RAPGEF3O95398 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC21.7■■□□□ 1.06
RAPGEF3O95398 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
RAPGEF3O95398 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAPGEF3O95398 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAPGEF3O95398 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC21.7■■□□□ 1.06
RAPGEF3O95398 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC21.7■■□□□ 1.06
RAPGEF3O95398 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAPGEF3O95398 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC21.69■■□□□ 1.06
RAPGEF3O95398 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAPGEF3O95398 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC21.69■■□□□ 1.06
RAPGEF3O95398 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC21.69■■□□□ 1.06
RAPGEF3O95398 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
RAPGEF3O95398 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RAPGEF3O95398 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC21.69■■□□□ 1.06
RAPGEF3O95398 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms