Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC15.58■□□□□ 0.08
SOX1O00570 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SOX1O00570 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SOX1O00570 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SOX1O00570 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.58■□□□□ 0.08
SOX1O00570 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SOX1O00570 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SOX1O00570 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.57■□□□□ 0.08
SOX1O00570 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SOX1O00570 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
SOX1O00570 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SOX1O00570 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SOX1O00570 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
SOX1O00570 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
SOX1O00570 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SOX1O00570 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SOX1O00570 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SOX1O00570 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.57■□□□□ 0.08
SOX1O00570 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SOX1O00570 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SOX1O00570 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SOX1O00570 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
SOX1O00570 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC15.57■□□□□ 0.08
SOX1O00570 MED15P3-201ENST00000413613 326 ntBASIC15.57■□□□□ 0.08
SOX1O00570 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC15.57■□□□□ 0.08
SOX1O00570 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC15.57■□□□□ 0.08
SOX1O00570 AC026412.1-206ENST00000502273 206 ntBASIC15.57■□□□□ 0.08
SOX1O00570 HINT1-205ENST00000508488 703 ntTSL 2 BASIC15.57■□□□□ 0.08
SOX1O00570 AC011431.1-201ENST00000512971 230 ntBASIC15.57■□□□□ 0.08
SOX1O00570 IGHV1-12-201ENST00000518307 205 ntBASIC15.57■□□□□ 0.08
SOX1O00570 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC15.57■□□□□ 0.08
SOX1O00570 LY6E-215ENST00000523847 427 ntTSL 3 BASIC15.57■□□□□ 0.08
SOX1O00570 ACY3-202ENST00000529256 933 ntTSL 3 BASIC15.57■□□□□ 0.08
SOX1O00570 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC15.57■□□□□ 0.08
SOX1O00570 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC15.57■□□□□ 0.08
SOX1O00570 ACTBP9-201ENST00000587663 1099 ntBASIC15.57■□□□□ 0.08
SOX1O00570 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC15.57■□□□□ 0.08
SOX1O00570 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC15.57■□□□□ 0.08
SOX1O00570 AC139713.2-207ENST00000641556 1292 ntBASIC15.57■□□□□ 0.08
SOX1O00570 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SOX1O00570 AC006449.6-201ENST00000612330 2296 ntBASIC15.57■□□□□ 0.08
SOX1O00570 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SOX1O00570 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SOX1O00570 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SOX1O00570 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
SOX1O00570 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SOX1O00570 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.56■□□□□ 0.08
SOX1O00570 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SOX1O00570 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SOX1O00570 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.56■□□□□ 0.08
SOX1O00570 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SOX1O00570 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SOX1O00570 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SOX1O00570 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SOX1O00570 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SOX1O00570 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SOX1O00570 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SOX1O00570 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SOX1O00570 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC15.56■□□□□ 0.08
SOX1O00570 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
SOX1O00570 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC15.56■□□□□ 0.08
SOX1O00570 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC15.56■□□□□ 0.08
SOX1O00570 ASS1P2-201ENST00000439895 1223 ntBASIC15.56■□□□□ 0.08
SOX1O00570 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SOX1O00570 ALG1L15P-201ENST00000482834 794 ntBASIC15.56■□□□□ 0.08
SOX1O00570 RN7SL564P-201ENST00000496309 250 ntBASIC15.56■□□□□ 0.08
SOX1O00570 AC095040.1-201ENST00000513286 675 ntBASIC15.56■□□□□ 0.08
SOX1O00570 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SOX1O00570 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC15.56■□□□□ 0.08
SOX1O00570 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC15.56■□□□□ 0.08
SOX1O00570 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC15.56■□□□□ 0.08
SOX1O00570 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SOX1O00570 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SOX1O00570 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SOX1O00570 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.56■□□□□ 0.08
SOX1O00570 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SOX1O00570 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.56■□□□□ 0.08
SOX1O00570 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SOX1O00570 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SOX1O00570 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SOX1O00570 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SOX1O00570 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SOX1O00570 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SOX1O00570 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SOX1O00570 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SOX1O00570 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SOX1O00570 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SOX1O00570 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SOX1O00570 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SOX1O00570 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SOX1O00570 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SOX1O00570 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.55■□□□□ 0.08
SOX1O00570 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SOX1O00570 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.55■□□□□ 0.08
SOX1O00570 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.55■□□□□ 0.08
SOX1O00570 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.55■□□□□ 0.08
SOX1O00570 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SOX1O00570 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SOX1O00570 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SOX1O00570 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms