Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 AC018665.1-201ENST00000622927 1362 ntBASIC15.54■□□□□ 0.08
SRRM3A6NNA2 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 AC004987.2-201ENST00000395959 1148 ntBASIC15.54■□□□□ 0.08
SRRM3A6NNA2 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 AC114501.2-201ENST00000439631 535 ntBASIC15.54■□□□□ 0.08
SRRM3A6NNA2 CSF2RBP1-201ENST00000447905 391 ntBASIC15.54■□□□□ 0.08
SRRM3A6NNA2 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 ZNF767P-206ENST00000513792 565 ntBASIC15.54■□□□□ 0.08
SRRM3A6NNA2 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 AC093726.1-201ENST00000608064 963 ntBASIC15.54■□□□□ 0.08
SRRM3A6NNA2 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 AL021578.1-201ENST00000613646 709 ntBASIC15.54■□□□□ 0.08
SRRM3A6NNA2 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 AC016397.2-201ENST00000624848 1985 ntBASIC15.54■□□□□ 0.08
SRRM3A6NNA2 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRRM3A6NNA2 AC084364.1-201ENST00000551967 1556 ntBASIC15.53■□□□□ 0.08
SRRM3A6NNA2 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
SRRM3A6NNA2 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRRM3A6NNA2 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
SRRM3A6NNA2 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SRRM3A6NNA2 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SRRM3A6NNA2 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRRM3A6NNA2 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRRM3A6NNA2 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.53■□□□□ 0.08
SRRM3A6NNA2 KRT8P22-201ENST00000562317 1415 ntBASIC15.53■□□□□ 0.08
SRRM3A6NNA2 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRRM3A6NNA2 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SRRM3A6NNA2 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRRM3A6NNA2 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRRM3A6NNA2 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRRM3A6NNA2 CICP11-201ENST00000434745 2827 ntBASIC15.53■□□□□ 0.08
SRRM3A6NNA2 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
SRRM3A6NNA2 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRRM3A6NNA2 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SRRM3A6NNA2 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.53■□□□□ 0.08
SRRM3A6NNA2 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
SRRM3A6NNA2 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRRM3A6NNA2 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRRM3A6NNA2 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.53■□□□□ 0.08
SRRM3A6NNA2 IGHJ2P-201ENST00000454480 60 ntBASIC15.53■□□□□ 0.08
SRRM3A6NNA2 AC007551.1-201ENST00000457394 519 ntBASIC15.53■□□□□ 0.08
SRRM3A6NNA2 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
SRRM3A6NNA2 KRT18P34-201ENST00000488218 1270 ntBASIC15.53■□□□□ 0.08
SRRM3A6NNA2 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.53■□□□□ 0.08
SRRM3A6NNA2 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.53■□□□□ 0.08
SRRM3A6NNA2 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRRM3A6NNA2 AC023310.3-201ENST00000557027 670 ntBASIC15.53■□□□□ 0.08
SRRM3A6NNA2 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.53■□□□□ 0.08
SRRM3A6NNA2 AC100756.1-201ENST00000562736 682 ntBASIC15.53■□□□□ 0.08
SRRM3A6NNA2 AC138749.3-201ENST00000567691 622 ntBASIC15.53■□□□□ 0.08
SRRM3A6NNA2 AC105021.1-202ENST00000570572 669 ntBASIC15.53■□□□□ 0.08
SRRM3A6NNA2 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.53■□□□□ 0.08
SRRM3A6NNA2 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.53■□□□□ 0.08
SRRM3A6NNA2 AC116165.1-201ENST00000611806 668 ntBASIC15.53■□□□□ 0.08
SRRM3A6NNA2 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.53■□□□□ 0.08
SRRM3A6NNA2 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SRRM3A6NNA2 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRRM3A6NNA2 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.53■□□□□ 0.08
SRRM3A6NNA2 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
SRRM3A6NNA2 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms