Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 RN7SL596P-201ENST00000582123 288 ntBASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 MIR4472-1-201ENST00000584349 80 ntBASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 AC009145.4-201ENST00000625119 1294 ntBASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LOC102724428A0A0B4J2F2 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LOC102724428A0A0B4J2F2 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LOC102724428A0A0B4J2F2 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.62■□□□□ 0.57
LOC102724428A0A0B4J2F2 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
LOC102724428A0A0B4J2F2 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.62■□□□□ 0.57
LOC102724428A0A0B4J2F2 GCSHP3-201ENST00000431120 391 ntBASIC18.62■□□□□ 0.57
LOC102724428A0A0B4J2F2 AC092580.1-201ENST00000433998 658 ntBASIC18.62■□□□□ 0.57
LOC102724428A0A0B4J2F2 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC18.62■□□□□ 0.57
LOC102724428A0A0B4J2F2 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC18.62■□□□□ 0.57
LOC102724428A0A0B4J2F2 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC18.62■□□□□ 0.57
LOC102724428A0A0B4J2F2 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC18.62■□□□□ 0.57
LOC102724428A0A0B4J2F2 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC18.62■□□□□ 0.57
LOC102724428A0A0B4J2F2 DRG2-220ENST00000583355 891 ntTSL 3 BASIC18.62■□□□□ 0.57
LOC102724428A0A0B4J2F2 AC007250.1-201ENST00000608934 338 ntBASIC18.62■□□□□ 0.57
LOC102724428A0A0B4J2F2 AC244250.3-201ENST00000620749 366 ntBASIC18.62■□□□□ 0.57
LOC102724428A0A0B4J2F2 AC073592.2-201ENST00000623062 780 ntBASIC18.62■□□□□ 0.57
LOC102724428A0A0B4J2F2 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LOC102724428A0A0B4J2F2 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
LOC102724428A0A0B4J2F2 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LOC102724428A0A0B4J2F2 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC18.62■□□□□ 0.57
LOC102724428A0A0B4J2F2 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LOC102724428A0A0B4J2F2 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LOC102724428A0A0B4J2F2 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LOC102724428A0A0B4J2F2 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC18.62■□□□□ 0.57
LOC102724428A0A0B4J2F2 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LOC102724428A0A0B4J2F2 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC18.62■□□□□ 0.57
LOC102724428A0A0B4J2F2 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC18.62■□□□□ 0.57
LOC102724428A0A0B4J2F2 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.62■□□□□ 0.57
LOC102724428A0A0B4J2F2 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LOC102724428A0A0B4J2F2 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LOC102724428A0A0B4J2F2 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LOC102724428A0A0B4J2F2 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LOC102724428A0A0B4J2F2 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LOC102724428A0A0B4J2F2 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.61■□□□□ 0.57
LOC102724428A0A0B4J2F2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LOC102724428A0A0B4J2F2 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LOC102724428A0A0B4J2F2 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC18.61■□□□□ 0.57
LOC102724428A0A0B4J2F2 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC18.61■□□□□ 0.57
LOC102724428A0A0B4J2F2 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC18.61■□□□□ 0.57
LOC102724428A0A0B4J2F2 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LOC102724428A0A0B4J2F2 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LOC102724428A0A0B4J2F2 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LOC102724428A0A0B4J2F2 FTX-216ENST00000638985 1367 ntTSL 5 BASIC18.61■□□□□ 0.57
LOC102724428A0A0B4J2F2 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LOC102724428A0A0B4J2F2 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LOC102724428A0A0B4J2F2 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC18.61■□□□□ 0.57
LOC102724428A0A0B4J2F2 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LOC102724428A0A0B4J2F2 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC18.61■□□□□ 0.57
LOC102724428A0A0B4J2F2 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC18.61■□□□□ 0.57
LOC102724428A0A0B4J2F2 OR8T1P-201ENST00000421347 918 ntBASIC18.61■□□□□ 0.57
LOC102724428A0A0B4J2F2 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC18.61■□□□□ 0.57
LOC102724428A0A0B4J2F2 DNM1P51-201ENST00000558149 522 ntBASIC18.61■□□□□ 0.57
LOC102724428A0A0B4J2F2 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC18.61■□□□□ 0.57
LOC102724428A0A0B4J2F2 AC068867.1-201ENST00000559855 150 ntBASIC18.61■□□□□ 0.57
LOC102724428A0A0B4J2F2 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC18.61■□□□□ 0.57
LOC102724428A0A0B4J2F2 AC140113.1-201ENST00000603467 169 ntBASIC18.61■□□□□ 0.57
LOC102724428A0A0B4J2F2 AL451007.2-201ENST00000632004 563 ntBASIC18.61■□□□□ 0.57
LOC102724428A0A0B4J2F2 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LOC102724428A0A0B4J2F2 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LOC102724428A0A0B4J2F2 AC011270.2-201ENST00000624293 2550 ntBASIC18.61■□□□□ 0.57
LOC102724428A0A0B4J2F2 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LOC102724428A0A0B4J2F2 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LOC102724428A0A0B4J2F2 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LOC102724428A0A0B4J2F2 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LOC102724428A0A0B4J2F2 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LOC102724428A0A0B4J2F2 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms