Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.07□□□□□ -0.16
CTSFQ9UBX1 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.07□□□□□ -0.16
CTSFQ9UBX1 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 AP001258.2-201ENST00000529891 490 ntBASIC14.07□□□□□ -0.16
CTSFQ9UBX1 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 AL136301.1-201ENST00000615830 422 ntBASIC14.07□□□□□ -0.16
CTSFQ9UBX1 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 AC006486.2-201ENST00000624246 2199 ntBASIC14.07□□□□□ -0.16
CTSFQ9UBX1 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 POM121L10P-201ENST00000436994 1285 ntBASIC14.06□□□□□ -0.16
CTSFQ9UBX1 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 KRT8P13-201ENST00000463294 1010 ntBASIC14.06□□□□□ -0.16
CTSFQ9UBX1 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTSFQ9UBX1 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 ZBED1P1-201ENST00000502364 1930 ntBASIC14.05□□□□□ -0.16
CTSFQ9UBX1 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms