Protein–RNA interactions for Protein: Q9HB31

SEBOX, Homeobox protein SEBOX, humanhuman

Predicted RBP Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEBOXQ9HB31 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 AL139094.1-201ENST00000405549 1188 ntBASIC12.78□□□□□ -0.36
SEBOXQ9HB31 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 HLA-K-203ENST00000430151 1046 ntBASIC12.78□□□□□ -0.36
SEBOXQ9HB31 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 GNAQP1-201ENST00000444815 1067 ntBASIC12.78□□□□□ -0.36
SEBOXQ9HB31 UGT1A2P-201ENST00000454886 866 ntBASIC12.78□□□□□ -0.36
SEBOXQ9HB31 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 SERBP1P5-201ENST00000510079 1181 ntBASIC12.78□□□□□ -0.36
SEBOXQ9HB31 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 SPCS2P1-201ENST00000561636 679 ntBASIC12.78□□□□□ -0.36
SEBOXQ9HB31 AC124283.3-201ENST00000570869 594 ntBASIC12.78□□□□□ -0.36
SEBOXQ9HB31 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEBOXQ9HB31 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.77□□□□□ -0.36
SEBOXQ9HB31 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SEBOXQ9HB31 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SEBOXQ9HB31 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SEBOXQ9HB31 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SEBOXQ9HB31 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.77□□□□□ -0.36
SEBOXQ9HB31 AL158070.2-201ENST00000623713 1621 ntBASIC12.77□□□□□ -0.36
SEBOXQ9HB31 AC136759.1-202ENST00000530858 2194 ntBASIC12.77□□□□□ -0.36
SEBOXQ9HB31 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SEBOXQ9HB31 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.77□□□□□ -0.36
SEBOXQ9HB31 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SEBOXQ9HB31 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
SEBOXQ9HB31 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
SEBOXQ9HB31 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
SEBOXQ9HB31 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SEBOXQ9HB31 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEBOXQ9HB31 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.77□□□□□ -0.37
SEBOXQ9HB31 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEBOXQ9HB31 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
SEBOXQ9HB31 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC12.77□□□□□ -0.37
SEBOXQ9HB31 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.77□□□□□ -0.37
SEBOXQ9HB31 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEBOXQ9HB31 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SEBOXQ9HB31 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEBOXQ9HB31 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEBOXQ9HB31 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEBOXQ9HB31 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.77□□□□□ -0.37
SEBOXQ9HB31 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.77□□□□□ -0.37
SEBOXQ9HB31 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC12.77□□□□□ -0.37
SEBOXQ9HB31 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.77□□□□□ -0.37
SEBOXQ9HB31 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.77□□□□□ -0.37
SEBOXQ9HB31 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEBOXQ9HB31 AC008761.3-201ENST00000624803 892 ntBASIC12.77□□□□□ -0.37
SEBOXQ9HB31 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEBOXQ9HB31 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
SEBOXQ9HB31 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.77□□□□□ -0.37
SEBOXQ9HB31 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SEBOXQ9HB31 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC12.77□□□□□ -0.37
SEBOXQ9HB31 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEBOXQ9HB31 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEBOXQ9HB31 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
SEBOXQ9HB31 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.77□□□□□ -0.37
SEBOXQ9HB31 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms