Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CCDC68Q9H2F9 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.08■□□□□ 0
CCDC68Q9H2F9 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCDC68Q9H2F9 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.08■□□□□ 0
CCDC68Q9H2F9 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.08■□□□□ 0
CCDC68Q9H2F9 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC68Q9H2F9 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCDC68Q9H2F9 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC68Q9H2F9 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCDC68Q9H2F9 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.08■□□□□ 0
CCDC68Q9H2F9 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCDC68Q9H2F9 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.08■□□□□ 0
CCDC68Q9H2F9 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.08■□□□□ 0
CCDC68Q9H2F9 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.08■□□□□ 0
CCDC68Q9H2F9 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.08■□□□□ 0
CCDC68Q9H2F9 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.08■□□□□ 0
CCDC68Q9H2F9 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC68Q9H2F9 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC68Q9H2F9 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC68Q9H2F9 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC68Q9H2F9 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCDC68Q9H2F9 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
CCDC68Q9H2F9 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC68Q9H2F9 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CCDC68Q9H2F9 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CCDC68Q9H2F9 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCDC68Q9H2F9 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CCDC68Q9H2F9 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CCDC68Q9H2F9 AL137783.1-201ENST00000623494 1896 ntBASIC15.08■□□□□ 0
CCDC68Q9H2F9 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CCDC68Q9H2F9 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0
CCDC68Q9H2F9 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCDC68Q9H2F9 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CCDC68Q9H2F9 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.08■□□□□ 0
CCDC68Q9H2F9 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC68Q9H2F9 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCDC68Q9H2F9 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC68Q9H2F9 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.07■□□□□ 0
CCDC68Q9H2F9 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC68Q9H2F9 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC68Q9H2F9 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.07■□□□□ 0
CCDC68Q9H2F9 AC018442.1-201ENST00000421439 2061 ntBASIC15.07■□□□□ 0
CCDC68Q9H2F9 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC68Q9H2F9 AC018529.2-202ENST00000611482 3087 ntBASIC15.07■□□□□ 0
CCDC68Q9H2F9 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCDC68Q9H2F9 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.07■□□□□ 0
CCDC68Q9H2F9 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CCDC68Q9H2F9 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC68Q9H2F9 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCDC68Q9H2F9 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CCDC68Q9H2F9 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC68Q9H2F9 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC68Q9H2F9 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC68Q9H2F9 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CCDC68Q9H2F9 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.07■□□□□ 0
CCDC68Q9H2F9 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.07■□□□□ 0
CCDC68Q9H2F9 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.07■□□□□ 0
CCDC68Q9H2F9 AC092552.1-201ENST00000547243 906 ntBASIC15.07■□□□□ 0
CCDC68Q9H2F9 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.07■□□□□ 0
CCDC68Q9H2F9 MIR8072-201ENST00000614241 80 ntBASIC15.07■□□□□ 0
CCDC68Q9H2F9 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.07■□□□□ 0
CCDC68Q9H2F9 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.07■□□□□ 0
CCDC68Q9H2F9 AC008761.3-201ENST00000624803 892 ntBASIC15.07■□□□□ 0
CCDC68Q9H2F9 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC68Q9H2F9 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.07■□□□□ 0
CCDC68Q9H2F9 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.07■□□□□ 0
CCDC68Q9H2F9 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC68Q9H2F9 KRT8P22-201ENST00000562317 1415 ntBASIC15.07■□□□□ 0
CCDC68Q9H2F9 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC68Q9H2F9 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.07■□□□□ 0
CCDC68Q9H2F9 LINC00552-201ENST00000625151 2579 ntBASIC15.07■□□□□ 0
CCDC68Q9H2F9 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC68Q9H2F9 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC68Q9H2F9 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC68Q9H2F9 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CCDC68Q9H2F9 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC68Q9H2F9 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.07■□□□□ 0
CCDC68Q9H2F9 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC68Q9H2F9 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC68Q9H2F9 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
CCDC68Q9H2F9 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.06■□□□□ 0
CCDC68Q9H2F9 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.06■□□□□ 0
CCDC68Q9H2F9 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC68Q9H2F9 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.06■□□□□ 0
CCDC68Q9H2F9 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC68Q9H2F9 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC68Q9H2F9 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC68Q9H2F9 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC68Q9H2F9 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CCDC68Q9H2F9 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC68Q9H2F9 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
CCDC68Q9H2F9 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC68Q9H2F9 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
CCDC68Q9H2F9 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC68Q9H2F9 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC68Q9H2F9 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC68Q9H2F9 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC68Q9H2F9 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC68Q9H2F9 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC68Q9H2F9 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms