Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.57■□□□□ 0.08
SMOQ99835 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMOQ99835 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.57■□□□□ 0.08
SMOQ99835 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMOQ99835 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMOQ99835 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.57■□□□□ 0.08
SMOQ99835 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SMOQ99835 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMOQ99835 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMOQ99835 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMOQ99835 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.57■□□□□ 0.08
SMOQ99835 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMOQ99835 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMOQ99835 AC023824.1-201ENST00000562945 2975 ntBASIC15.57■□□□□ 0.08
SMOQ99835 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SMOQ99835 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMOQ99835 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMOQ99835 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.56■□□□□ 0.08
SMOQ99835 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.56■□□□□ 0.08
SMOQ99835 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.56■□□□□ 0.08
SMOQ99835 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SMOQ99835 AC006504.5-208ENST00000588784 2401 ntBASIC15.56■□□□□ 0.08
SMOQ99835 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMOQ99835 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
SMOQ99835 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SMOQ99835 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMOQ99835 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SMOQ99835 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMOQ99835 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
SMOQ99835 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.56■□□□□ 0.08
SMOQ99835 AC004898.1-201ENST00000451057 766 ntBASIC15.56■□□□□ 0.08
SMOQ99835 AC099548.2-209ENST00000480264 625 ntBASIC15.56■□□□□ 0.08
SMOQ99835 AC021723.1-201ENST00000486306 515 ntBASIC15.56■□□□□ 0.08
SMOQ99835 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMOQ99835 AC126915.1-201ENST00000522847 1038 ntBASIC15.56■□□□□ 0.08
SMOQ99835 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.56■□□□□ 0.08
SMOQ99835 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.56■□□□□ 0.08
SMOQ99835 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.56■□□□□ 0.08
SMOQ99835 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.56■□□□□ 0.08
SMOQ99835 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.56■□□□□ 0.08
SMOQ99835 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SMOQ99835 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SMOQ99835 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMOQ99835 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SMOQ99835 BNIP3P13-201ENST00000599968 566 ntBASIC15.56■□□□□ 0.08
SMOQ99835 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SMOQ99835 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
SMOQ99835 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMOQ99835 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMOQ99835 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SMOQ99835 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SMOQ99835 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SMOQ99835 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SMOQ99835 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.56■□□□□ 0.08
SMOQ99835 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
SMOQ99835 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SMOQ99835 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SMOQ99835 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMOQ99835 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SMOQ99835 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMOQ99835 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMOQ99835 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.56■□□□□ 0.08
SMOQ99835 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMOQ99835 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMOQ99835 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMOQ99835 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMOQ99835 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
SMOQ99835 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SMOQ99835 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.55■□□□□ 0.08
SMOQ99835 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
SMOQ99835 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMOQ99835 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMOQ99835 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SMOQ99835 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.55■□□□□ 0.08
SMOQ99835 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMOQ99835 AC139712.1-201ENST00000378256 1875 ntBASIC15.55■□□□□ 0.08
SMOQ99835 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMOQ99835 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SMOQ99835 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMOQ99835 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SMOQ99835 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SMOQ99835 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SMOQ99835 GPAA1P2-201ENST00000417923 928 ntBASIC15.55■□□□□ 0.08
SMOQ99835 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.55■□□□□ 0.08
SMOQ99835 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.55■□□□□ 0.08
SMOQ99835 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.55■□□□□ 0.08
SMOQ99835 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.55■□□□□ 0.08
SMOQ99835 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.55■□□□□ 0.08
SMOQ99835 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.55■□□□□ 0.08
SMOQ99835 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.55■□□□□ 0.08
SMOQ99835 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.55■□□□□ 0.08
SMOQ99835 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SMOQ99835 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.55■□□□□ 0.08
SMOQ99835 AC005324.6-201ENST00000587972 613 ntBASIC15.55■□□□□ 0.08
SMOQ99835 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.55■□□□□ 0.08
SMOQ99835 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.55■□□□□ 0.08
SMOQ99835 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.55■□□□□ 0.08
SMOQ99835 Z98259.2-201ENST00000641583 609 ntBASIC15.55■□□□□ 0.08
SMOQ99835 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMOQ99835 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms