Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
BBS4Q96RK4 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BBS4Q96RK4 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.23□□□□□ -0.13
BBS4Q96RK4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.23□□□□□ -0.13
BBS4Q96RK4 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.23□□□□□ -0.13
BBS4Q96RK4 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.23□□□□□ -0.13
BBS4Q96RK4 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.23□□□□□ -0.13
BBS4Q96RK4 ACKR1-201ENST00000368121 1240 ntBASIC14.23□□□□□ -0.13
BBS4Q96RK4 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
BBS4Q96RK4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.23□□□□□ -0.13
BBS4Q96RK4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.23□□□□□ -0.13
BBS4Q96RK4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.23□□□□□ -0.13
BBS4Q96RK4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
BBS4Q96RK4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.23□□□□□ -0.13
BBS4Q96RK4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.23□□□□□ -0.13
BBS4Q96RK4 WASH4P-201ENST00000564273 1246 ntBASIC14.23□□□□□ -0.13
BBS4Q96RK4 TP53TG3HP-202ENST00000569755 579 ntBASIC14.23□□□□□ -0.13
BBS4Q96RK4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.23□□□□□ -0.13
BBS4Q96RK4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.23□□□□□ -0.13
BBS4Q96RK4 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BBS4Q96RK4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.23□□□□□ -0.13
BBS4Q96RK4 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
BBS4Q96RK4 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
BBS4Q96RK4 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
BBS4Q96RK4 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
BBS4Q96RK4 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
BBS4Q96RK4 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
BBS4Q96RK4 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
BBS4Q96RK4 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.23□□□□□ -0.13
BBS4Q96RK4 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BBS4Q96RK4 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
BBS4Q96RK4 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
BBS4Q96RK4 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BBS4Q96RK4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
BBS4Q96RK4 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.23□□□□□ -0.13
BBS4Q96RK4 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
BBS4Q96RK4 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
BBS4Q96RK4 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
BBS4Q96RK4 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.23□□□□□ -0.13
BBS4Q96RK4 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.23□□□□□ -0.13
BBS4Q96RK4 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.23□□□□□ -0.13
BBS4Q96RK4 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
BBS4Q96RK4 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
BBS4Q96RK4 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BBS4Q96RK4 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
BBS4Q96RK4 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
BBS4Q96RK4 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.22□□□□□ -0.13
BBS4Q96RK4 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
BBS4Q96RK4 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
BBS4Q96RK4 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BBS4Q96RK4 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BBS4Q96RK4 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BBS4Q96RK4 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
BBS4Q96RK4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.22□□□□□ -0.13
BBS4Q96RK4 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.22□□□□□ -0.13
BBS4Q96RK4 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.22□□□□□ -0.13
BBS4Q96RK4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
BBS4Q96RK4 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.22□□□□□ -0.13
BBS4Q96RK4 GIMAP3P-201ENST00000495150 836 ntBASIC14.22□□□□□ -0.13
BBS4Q96RK4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.22□□□□□ -0.13
BBS4Q96RK4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
BBS4Q96RK4 DUX4L47-201ENST00000566374 394 ntBASIC14.22□□□□□ -0.13
BBS4Q96RK4 AC009486.1-201ENST00000569860 813 ntBASIC14.22□□□□□ -0.13
BBS4Q96RK4 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.22□□□□□ -0.13
BBS4Q96RK4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.22□□□□□ -0.13
BBS4Q96RK4 AC092364.2-202ENST00000597012 1073 ntBASIC14.22□□□□□ -0.13
BBS4Q96RK4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.22□□□□□ -0.13
BBS4Q96RK4 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.22□□□□□ -0.13
BBS4Q96RK4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.22□□□□□ -0.13
BBS4Q96RK4 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.22□□□□□ -0.13
BBS4Q96RK4 AL603764.1-201ENST00000636452 321 ntBASIC14.22□□□□□ -0.13
BBS4Q96RK4 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.22□□□□□ -0.13
BBS4Q96RK4 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.22□□□□□ -0.13
BBS4Q96RK4 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
BBS4Q96RK4 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.22□□□□□ -0.13
BBS4Q96RK4 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BBS4Q96RK4 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
BBS4Q96RK4 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BBS4Q96RK4 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BBS4Q96RK4 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.22□□□□□ -0.13
BBS4Q96RK4 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.22□□□□□ -0.13
BBS4Q96RK4 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BBS4Q96RK4 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
BBS4Q96RK4 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.22□□□□□ -0.13
BBS4Q96RK4 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
BBS4Q96RK4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
BBS4Q96RK4 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
BBS4Q96RK4 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
BBS4Q96RK4 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.21□□□□□ -0.13
BBS4Q96RK4 KRT8P35-201ENST00000483942 1338 ntBASIC14.21□□□□□ -0.13
BBS4Q96RK4 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
BBS4Q96RK4 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
BBS4Q96RK4 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BBS4Q96RK4 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.21□□□□□ -0.13
BBS4Q96RK4 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BBS4Q96RK4 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
BBS4Q96RK4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BBS4Q96RK4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
BBS4Q96RK4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BBS4Q96RK4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms