Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 NME2P1-201ENST00000426182 414 ntBASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 AP001063.1-201ENST00000568332 529 ntBASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 AC004466.1-201ENST00000599515 1080 ntBASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 AC117489.1-201ENST00000625169 3217 ntBASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 AL645937.2-201ENST00000396808 931 ntBASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 COX5BP8-201ENST00000416911 349 ntBASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 AC026434.2-201ENST00000506094 1078 ntBASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 TDH-203ENST00000531764 1110 ntBASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 AP005019.2-201ENST00000615104 511 ntBASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SIMC1Q8NDZ2 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
SIMC1Q8NDZ2 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 AC098614.1-201ENST00000368528 745 ntBASIC14.14□□□□□ -0.15
SIMC1Q8NDZ2 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms