Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 AC078819.1-201ENST00000547454 765 ntBASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 AC012085.1-201ENST00000548270 765 ntBASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 AC023310.1-201ENST00000554836 735 ntBASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 AC138951.2-201ENST00000623455 1161 ntBASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 AC013726.1-201ENST00000563747 2285 ntBASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 MIR1247-201ENST00000408206 136 ntBASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 DUX4L45-201ENST00000566406 1057 ntBASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 AP005019.2-201ENST00000615104 511 ntBASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 AL365209.1-201ENST00000624418 6473 ntBASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC33Q8N5R6 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 MTHFR-210ENST00000641407 2387 ntBASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 AC005089.1-201ENST00000619486 2241 ntBASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms