Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 FTX-216ENST00000638985 1367 ntTSL 5 BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 HCG27-204ENST00000424675 895 ntTSL 3 BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 RN7SL455P-201ENST00000580629 282 ntBASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 AL021707.6-201ENST00000609212 491 ntBASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC13.61□□□□□ -0.23
COL27A1Q8IZC6 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 SURF4-203ENST00000371991 715 ntTSL 3 BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 STK24P1-201ENST00000455035 1291 ntBASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
COL27A1Q8IZC6 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 AC027139.1-201ENST00000565286 951 ntBASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 RN7SL596P-201ENST00000582123 288 ntBASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms