Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 ELK2AP-201ENST00000392510 1007 ntBASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 RN7SL11P-201ENST00000471305 293 ntBASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 RN7SL720P-201ENST00000488178 304 ntBASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 AC125604.1-201ENST00000496255 707 ntBASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 AC245884.6-201ENST00000515672 1067 ntBASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 AC091544.8-201ENST00000619490 361 ntBASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 Z98259.2-201ENST00000641583 609 ntBASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 WASH3P-207ENST00000560956 1394 ntBASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 AC092384.3-202ENST00000564646 2873 ntBASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC62Q6P9F0 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 AL133466.1-201ENST00000447582 150 ntBASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 AL132994.2-201ENST00000603120 687 ntBASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 AF254983.2-201ENST00000612331 135 ntBASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms