Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKAL1Q5VV42 AC139712.1-201ENST00000378256 1875 ntBASIC16.3■□□□□ 0.2
CDKAL1Q5VV42 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKAL1Q5VV42 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CDKAL1Q5VV42 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDKAL1Q5VV42 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC16.3■□□□□ 0.2
CDKAL1Q5VV42 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKAL1Q5VV42 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC16.3■□□□□ 0.2
CDKAL1Q5VV42 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC16.3■□□□□ 0.2
CDKAL1Q5VV42 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKAL1Q5VV42 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
CDKAL1Q5VV42 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CDKAL1Q5VV42 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKAL1Q5VV42 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKAL1Q5VV42 AC090643.2-201ENST00000623442 2029 ntBASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 MAPT-IT1-201ENST00000624111 3016 ntBASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC16.29■□□□□ 0.2
CDKAL1Q5VV42 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 AC105206.1-202ENST00000314927 2368 ntBASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 CHCHD2P3-201ENST00000603038 451 ntBASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 AC133539.2-201ENST00000604757 467 ntBASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms