Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHROOM1Q2M3G4 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHROOM1Q2M3G4 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.26■□□□□ 0.35
SHROOM1Q2M3G4 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.26■□□□□ 0.35
SHROOM1Q2M3G4 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHROOM1Q2M3G4 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC17.26■□□□□ 0.35
SHROOM1Q2M3G4 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHROOM1Q2M3G4 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHROOM1Q2M3G4 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SHROOM1Q2M3G4 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC17.26■□□□□ 0.35
SHROOM1Q2M3G4 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC17.26■□□□□ 0.35
SHROOM1Q2M3G4 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC17.26■□□□□ 0.35
SHROOM1Q2M3G4 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC17.26■□□□□ 0.35
SHROOM1Q2M3G4 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHROOM1Q2M3G4 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC17.26■□□□□ 0.35
SHROOM1Q2M3G4 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.26■□□□□ 0.35
SHROOM1Q2M3G4 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SHROOM1Q2M3G4 MIR3147-201ENST00000577811 66 ntBASIC17.26■□□□□ 0.35
SHROOM1Q2M3G4 WDR7-208ENST00000589935 544 ntTSL 4 BASIC17.26■□□□□ 0.35
SHROOM1Q2M3G4 IRF3-215ENST00000596822 823 ntTSL 3 BASIC17.26■□□□□ 0.35
SHROOM1Q2M3G4 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC17.26■□□□□ 0.35
SHROOM1Q2M3G4 AC006453.1-201ENST00000636037 1257 ntBASIC17.26■□□□□ 0.35
SHROOM1Q2M3G4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.26■□□□□ 0.35
SHROOM1Q2M3G4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.26■□□□□ 0.35
SHROOM1Q2M3G4 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SHROOM1Q2M3G4 AC018629.1-201ENST00000623381 1736 ntBASIC17.26■□□□□ 0.35
SHROOM1Q2M3G4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.26■□□□□ 0.35
SHROOM1Q2M3G4 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHROOM1Q2M3G4 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHROOM1Q2M3G4 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHROOM1Q2M3G4 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHROOM1Q2M3G4 AL136172.1-201ENST00000598590 1394 ntBASIC17.26■□□□□ 0.35
SHROOM1Q2M3G4 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SHROOM1Q2M3G4 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHROOM1Q2M3G4 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 AL590440.2-201ENST00000641973 1595 ntBASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 TBC1D3J-201ENST00000620719 1426 ntBASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 HNRNPA1P27-201ENST00000412087 955 ntBASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 AC006335.1-201ENST00000445200 547 ntBASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHROOM1Q2M3G4 AC144831.1-201ENST00000573312 2656 ntBASIC17.24■□□□□ 0.35
SHROOM1Q2M3G4 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.24■□□□□ 0.35
SHROOM1Q2M3G4 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHROOM1Q2M3G4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHROOM1Q2M3G4 AP002414.2-201ENST00000591780 3365 ntBASIC17.24■□□□□ 0.35
SHROOM1Q2M3G4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHROOM1Q2M3G4 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHROOM1Q2M3G4 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHROOM1Q2M3G4 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHROOM1Q2M3G4 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHROOM1Q2M3G4 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms