Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RSPO4Q2I0M5 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RSPO4Q2I0M5 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
RSPO4Q2I0M5 AL596087.1-201ENST00000400979 1969 ntBASIC14.33□□□□□ -0.12
RSPO4Q2I0M5 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RSPO4Q2I0M5 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 AF274858.1-201ENST00000406288 372 ntBASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 AC092580.1-201ENST00000433998 658 ntBASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 CHCHD2P2-201ENST00000503744 321 ntBASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 AC106047.2-201ENST00000511723 743 ntBASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 AC010503.4-201ENST00000615487 688 ntBASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.32□□□□□ -0.12
RSPO4Q2I0M5 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 KRT17P5-201ENST00000332088 839 ntBASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 VENTXP4-201ENST00000449029 958 ntBASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 GOLGA2P7-209ENST00000560408 745 ntBASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 AC007952.4-201ENST00000573866 637 ntBASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 RN7SL357P-201ENST00000581065 298 ntBASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 RN7SL121P-201ENST00000584223 273 ntBASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 AC140113.1-201ENST00000603467 169 ntBASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 AC006483.2-201ENST00000609813 515 ntBASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 AC133540.1-201ENST00000620845 1019 ntBASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 WASH7P-201ENST00000488147 1351 ntBASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 PRAL-201ENST00000624952 3286 ntBASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.31□□□□□ -0.12
RSPO4Q2I0M5 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms