Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 TDH-203ENST00000531764 1110 ntBASIC15.58■□□□□ 0.08
CDH6P55285 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CDH6P55285 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
CDH6P55285 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
CDH6P55285 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.58■□□□□ 0.08
CDH6P55285 AC010319.3-201ENST00000597028 470 ntBASIC15.58■□□□□ 0.08
CDH6P55285 RPSAP52-203ENST00000622976 1023 ntBASIC15.58■□□□□ 0.08
CDH6P55285 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CDH6P55285 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH6P55285 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.58■□□□□ 0.08
CDH6P55285 AC134312.5-201ENST00000568031 1313 ntBASIC15.58■□□□□ 0.08
CDH6P55285 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH6P55285 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH6P55285 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH6P55285 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH6P55285 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.58■□□□□ 0.08
CDH6P55285 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH6P55285 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDH6P55285 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH6P55285 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDH6P55285 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDH6P55285 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH6P55285 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CDH6P55285 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.57■□□□□ 0.08
CDH6P55285 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH6P55285 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.57■□□□□ 0.08
CDH6P55285 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.57■□□□□ 0.08
CDH6P55285 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.57■□□□□ 0.08
CDH6P55285 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH6P55285 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH6P55285 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
CDH6P55285 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH6P55285 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.57■□□□□ 0.08
CDH6P55285 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CDH6P55285 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH6P55285 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.57■□□□□ 0.08
CDH6P55285 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH6P55285 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.57■□□□□ 0.08
CDH6P55285 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CDH6P55285 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.57■□□□□ 0.08
CDH6P55285 BAATP1-201ENST00000412284 1225 ntBASIC15.57■□□□□ 0.08
CDH6P55285 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH6P55285 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH6P55285 ACTG1P3-201ENST00000431775 1114 ntBASIC15.57■□□□□ 0.08
CDH6P55285 AC007969.1-201ENST00000433675 447 ntBASIC15.57■□□□□ 0.08
CDH6P55285 AC012441.1-201ENST00000446669 685 ntBASIC15.57■□□□□ 0.08
CDH6P55285 RN7SL692P-201ENST00000464677 288 ntBASIC15.57■□□□□ 0.08
CDH6P55285 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.57■□□□□ 0.08
CDH6P55285 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.57■□□□□ 0.08
CDH6P55285 PTP4A1P2-201ENST00000546033 454 ntBASIC15.57■□□□□ 0.08
CDH6P55285 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.57■□□□□ 0.08
CDH6P55285 MIR5189-201ENST00000577370 114 ntBASIC15.57■□□□□ 0.08
CDH6P55285 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
CDH6P55285 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CDH6P55285 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CDH6P55285 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH6P55285 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH6P55285 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH6P55285 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CDH6P55285 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH6P55285 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH6P55285 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.57■□□□□ 0.08
CDH6P55285 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH6P55285 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.57■□□□□ 0.08
CDH6P55285 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH6P55285 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH6P55285 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH6P55285 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH6P55285 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH6P55285 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CDH6P55285 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.57■□□□□ 0.08
CDH6P55285 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.57■□□□□ 0.08
CDH6P55285 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.57■□□□□ 0.08
CDH6P55285 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH6P55285 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH6P55285 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CDH6P55285 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH6P55285 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH6P55285 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH6P55285 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH6P55285 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH6P55285 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH6P55285 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CDH6P55285 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH6P55285 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH6P55285 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH6P55285 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH6P55285 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
CDH6P55285 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH6P55285 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH6P55285 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH6P55285 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH6P55285 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH6P55285 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH6P55285 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH6P55285 RN7SL752P-201ENST00000463779 287 ntBASIC15.56■□□□□ 0.08
CDH6P55285 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH6P55285 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH6P55285 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH6P55285 AC145423.3-201ENST00000615987 467 ntBASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms