Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SNCAP37840 POLD2P1-201ENST00000511220 997 ntBASIC12.39□□□□□ -0.43
SNCAP37840 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.39□□□□□ -0.43
SNCAP37840 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SNCAP37840 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.39□□□□□ -0.43
SNCAP37840 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.39□□□□□ -0.43
SNCAP37840 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.39□□□□□ -0.43
SNCAP37840 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
SNCAP37840 AC022145.2-201ENST00000598203 171 ntBASIC12.39□□□□□ -0.43
SNCAP37840 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC12.39□□□□□ -0.43
SNCAP37840 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.39□□□□□ -0.43
SNCAP37840 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC12.39□□□□□ -0.43
SNCAP37840 AC105339.1-204ENST00000636249 355 ntBASIC12.39□□□□□ -0.43
SNCAP37840 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SNCAP37840 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.39□□□□□ -0.43
SNCAP37840 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SNCAP37840 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SNCAP37840 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SNCAP37840 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SNCAP37840 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.39□□□□□ -0.43
SNCAP37840 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SNCAP37840 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SNCAP37840 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SNCAP37840 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SNCAP37840 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SNCAP37840 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SNCAP37840 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.39□□□□□ -0.43
SNCAP37840 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SNCAP37840 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.39□□□□□ -0.43
SNCAP37840 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SNCAP37840 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SNCAP37840 AC083964.2-201ENST00000623988 2396 ntBASIC12.38□□□□□ -0.43
SNCAP37840 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SNCAP37840 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
SNCAP37840 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SNCAP37840 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SNCAP37840 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.38□□□□□ -0.43
SNCAP37840 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SNCAP37840 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
SNCAP37840 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SNCAP37840 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC12.38□□□□□ -0.43
SNCAP37840 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
SNCAP37840 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SNCAP37840 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.38□□□□□ -0.43
SNCAP37840 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SNCAP37840 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SNCAP37840 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SNCAP37840 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.38□□□□□ -0.43
SNCAP37840 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.38□□□□□ -0.43
SNCAP37840 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SNCAP37840 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.38□□□□□ -0.43
SNCAP37840 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SNCAP37840 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
SNCAP37840 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
SNCAP37840 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SNCAP37840 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.38□□□□□ -0.43
SNCAP37840 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SNCAP37840 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SNCAP37840 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SNCAP37840 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SNCAP37840 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.38□□□□□ -0.43
SNCAP37840 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.38□□□□□ -0.43
SNCAP37840 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
SNCAP37840 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.38□□□□□ -0.43
SNCAP37840 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SNCAP37840 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.38□□□□□ -0.43
SNCAP37840 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SNCAP37840 SPDYE17-201ENST00000412399 783 ntBASIC12.38□□□□□ -0.43
SNCAP37840 RBPMS2P1-201ENST00000437762 623 ntBASIC12.38□□□□□ -0.43
SNCAP37840 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.38□□□□□ -0.43
SNCAP37840 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.38□□□□□ -0.43
SNCAP37840 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.38□□□□□ -0.43
SNCAP37840 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.38□□□□□ -0.43
SNCAP37840 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.38□□□□□ -0.43
SNCAP37840 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SNCAP37840 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SNCAP37840 AL121894.2-201ENST00000602977 491 ntBASIC12.38□□□□□ -0.43
SNCAP37840 RN7SL828P-201ENST00000607615 303 ntBASIC12.38□□□□□ -0.43
SNCAP37840 MIR6069-201ENST00000620069 79 ntBASIC12.38□□□□□ -0.43
SNCAP37840 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SNCAP37840 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SNCAP37840 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.38□□□□□ -0.43
SNCAP37840 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
SNCAP37840 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC12.38□□□□□ -0.43
SNCAP37840 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SNCAP37840 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SNCAP37840 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SNCAP37840 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SNCAP37840 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SNCAP37840 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
SNCAP37840 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SNCAP37840 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.38□□□□□ -0.43
SNCAP37840 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SNCAP37840 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNCAP37840 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
SNCAP37840 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12.37□□□□□ -0.43
SNCAP37840 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNCAP37840 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNCAP37840 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SNCAP37840 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms