Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AP006288.1-201ENST00000446065 395 ntBASIC17.08■□□□□ 0.32
CLCN1P35523 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.08■□□□□ 0.32
CLCN1P35523 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.08■□□□□ 0.32
CLCN1P35523 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN1P35523 AC105021.1-202ENST00000570572 669 ntBASIC17.08■□□□□ 0.32
CLCN1P35523 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.08■□□□□ 0.32
CLCN1P35523 RN7SL121P-201ENST00000584223 273 ntBASIC17.08■□□□□ 0.32
CLCN1P35523 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.08■□□□□ 0.32
CLCN1P35523 AC134684.3-201ENST00000641758 218 ntBASIC17.08■□□□□ 0.32
CLCN1P35523 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC17.08■□□□□ 0.32
CLCN1P35523 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC17.08■□□□□ 0.32
CLCN1P35523 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN1P35523 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN1P35523 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN1P35523 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.08■□□□□ 0.32
CLCN1P35523 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN1P35523 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC17.08■□□□□ 0.32
CLCN1P35523 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CLCN1P35523 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN1P35523 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN1P35523 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.07■□□□□ 0.32
CLCN1P35523 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN1P35523 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.07■□□□□ 0.32
CLCN1P35523 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC17.07■□□□□ 0.32
CLCN1P35523 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN1P35523 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN1P35523 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CLCN1P35523 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN1P35523 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN1P35523 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN1P35523 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
CLCN1P35523 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC17.07■□□□□ 0.32
CLCN1P35523 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN1P35523 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN1P35523 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN1P35523 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN1P35523 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CLCN1P35523 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN1P35523 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.07■□□□□ 0.32
CLCN1P35523 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN1P35523 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.07■□□□□ 0.32
CLCN1P35523 AC023141.5-201ENST00000458585 616 ntBASIC17.07■□□□□ 0.32
CLCN1P35523 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CLCN1P35523 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
CLCN1P35523 AC026979.3-201ENST00000607315 403 ntBASIC17.07■□□□□ 0.32
CLCN1P35523 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.07■□□□□ 0.32
CLCN1P35523 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN1P35523 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CLCN1P35523 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN1P35523 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN1P35523 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN1P35523 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN1P35523 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN1P35523 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN1P35523 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC17.07■□□□□ 0.32
CLCN1P35523 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN1P35523 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN1P35523 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN1P35523 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN1P35523 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN1P35523 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN1P35523 AL022323.5-201ENST00000624101 2059 ntBASIC17.06■□□□□ 0.32
CLCN1P35523 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.06■□□□□ 0.32
CLCN1P35523 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN1P35523 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.06■□□□□ 0.32
CLCN1P35523 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CLCN1P35523 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN1P35523 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN1P35523 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN1P35523 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC17.06■□□□□ 0.32
CLCN1P35523 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.06■□□□□ 0.32
CLCN1P35523 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CLCN1P35523 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN1P35523 AC090505.1-201ENST00000430515 1834 ntBASIC17.06■□□□□ 0.32
CLCN1P35523 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC17.06■□□□□ 0.32
CLCN1P35523 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN1P35523 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CLCN1P35523 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN1P35523 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN1P35523 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN1P35523 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.06■□□□□ 0.32
CLCN1P35523 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN1P35523 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN1P35523 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.06■□□□□ 0.32
CLCN1P35523 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.06■□□□□ 0.32
CLCN1P35523 AC027612.4-201ENST00000605371 583 ntBASIC17.06■□□□□ 0.32
CLCN1P35523 AL133215.2-201ENST00000609242 977 ntBASIC17.06■□□□□ 0.32
CLCN1P35523 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.06■□□□□ 0.32
CLCN1P35523 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC17.06■□□□□ 0.32
CLCN1P35523 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC17.06■□□□□ 0.32
CLCN1P35523 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN1P35523 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN1P35523 NME1-209ENST00000511355 1645 ntTSL 5 BASIC17.06■□□□□ 0.32
CLCN1P35523 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN1P35523 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CLCN1P35523 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CLCN1P35523 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC17.06■□□□□ 0.32
CLCN1P35523 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.06■□□□□ 0.32
CLCN1P35523 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN1P35523 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms