Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 AC145423.3-201ENST00000615987 467 ntBASIC15.79■□□□□ 0.12
RFC1P35251 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
RFC1P35251 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFC1P35251 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.79■□□□□ 0.12
RFC1P35251 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFC1P35251 SNX18-202ENST00000343017 3140 ntBASIC15.79■□□□□ 0.12
RFC1P35251 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFC1P35251 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RFC1P35251 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.78■□□□□ 0.12
RFC1P35251 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RFC1P35251 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RFC1P35251 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RFC1P35251 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.78■□□□□ 0.12
RFC1P35251 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFC1P35251 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.78■□□□□ 0.12
RFC1P35251 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFC1P35251 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFC1P35251 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.78■□□□□ 0.12
RFC1P35251 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFC1P35251 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RFC1P35251 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFC1P35251 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.78■□□□□ 0.12
RFC1P35251 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFC1P35251 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFC1P35251 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
RFC1P35251 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFC1P35251 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.78■□□□□ 0.12
RFC1P35251 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.78■□□□□ 0.12
RFC1P35251 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
RFC1P35251 FO681548.1-201ENST00000455617 1132 ntBASIC15.78■□□□□ 0.12
RFC1P35251 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.78■□□□□ 0.12
RFC1P35251 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RFC1P35251 AC068587.3-201ENST00000526613 355 ntBASIC15.78■□□□□ 0.12
RFC1P35251 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RFC1P35251 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.78■□□□□ 0.12
RFC1P35251 PTP4A1P2-201ENST00000546033 454 ntBASIC15.78■□□□□ 0.12
RFC1P35251 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.78■□□□□ 0.12
RFC1P35251 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.78■□□□□ 0.12
RFC1P35251 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.78■□□□□ 0.12
RFC1P35251 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.78■□□□□ 0.12
RFC1P35251 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFC1P35251 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RFC1P35251 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.78■□□□□ 0.12
RFC1P35251 AC026748.1-201ENST00000624349 3251 ntBASIC15.78■□□□□ 0.12
RFC1P35251 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFC1P35251 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFC1P35251 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RFC1P35251 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RFC1P35251 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RFC1P35251 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFC1P35251 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFC1P35251 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RFC1P35251 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFC1P35251 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFC1P35251 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFC1P35251 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFC1P35251 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFC1P35251 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RFC1P35251 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RFC1P35251 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RFC1P35251 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.77■□□□□ 0.12
RFC1P35251 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
RFC1P35251 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RFC1P35251 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RFC1P35251 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RFC1P35251 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.77■□□□□ 0.12
RFC1P35251 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RFC1P35251 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RFC1P35251 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RFC1P35251 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RFC1P35251 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RFC1P35251 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.77■□□□□ 0.12
RFC1P35251 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RFC1P35251 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RFC1P35251 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.77■□□□□ 0.12
RFC1P35251 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RFC1P35251 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RFC1P35251 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RFC1P35251 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.77■□□□□ 0.12
RFC1P35251 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RFC1P35251 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RFC1P35251 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.77■□□□□ 0.12
RFC1P35251 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RFC1P35251 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RFC1P35251 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.77■□□□□ 0.12
RFC1P35251 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RFC1P35251 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.77■□□□□ 0.12
RFC1P35251 AC011495.1-201ENST00000498085 584 ntBASIC15.77■□□□□ 0.12
RFC1P35251 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RFC1P35251 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
RFC1P35251 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
RFC1P35251 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.77■□□□□ 0.12
RFC1P35251 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.77■□□□□ 0.12
RFC1P35251 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
RFC1P35251 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RFC1P35251 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
RFC1P35251 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
RFC1P35251 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.77■□□□□ 0.12
RFC1P35251 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RFC1P35251 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms