Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AC097065.1-201ENST00000425737 517 ntBASIC19.73■□□□□ 0.75
USP6P35125 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC19.73■□□□□ 0.75
USP6P35125 BUD31-205ENST00000456893 512 ntTSL 5 BASIC19.73■□□□□ 0.75
USP6P35125 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
USP6P35125 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC19.73■□□□□ 0.75
USP6P35125 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP6P35125 MIR3180-2-201ENST00000581748 88 ntBASIC19.73■□□□□ 0.75
USP6P35125 AL591471.1-201ENST00000621855 229 ntBASIC19.73■□□□□ 0.75
USP6P35125 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC19.73■□□□□ 0.75
USP6P35125 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC19.73■□□□□ 0.75
USP6P35125 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP6P35125 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
USP6P35125 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP6P35125 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP6P35125 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC19.73■□□□□ 0.75
USP6P35125 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP6P35125 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP6P35125 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP6P35125 PAUPAR-201ENST00000630360 2965 ntBASIC19.73■□□□□ 0.75
USP6P35125 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
USP6P35125 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP6P35125 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP6P35125 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP6P35125 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP6P35125 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC19.72■□□□□ 0.75
USP6P35125 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
USP6P35125 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP6P35125 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP6P35125 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP6P35125 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC19.72■□□□□ 0.75
USP6P35125 AC127024.7-201ENST00000625101 200 ntBASIC19.72■□□□□ 0.75
USP6P35125 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP6P35125 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP6P35125 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP6P35125 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP6P35125 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
USP6P35125 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP6P35125 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP6P35125 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
USP6P35125 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.72■□□□□ 0.75
USP6P35125 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP6P35125 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP6P35125 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP6P35125 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP6P35125 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP6P35125 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP6P35125 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC19.72■□□□□ 0.75
USP6P35125 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.72■□□□□ 0.75
USP6P35125 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP6P35125 AC013268.4-201ENST00000637413 2228 ntBASIC19.71■□□□□ 0.75
USP6P35125 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP6P35125 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
USP6P35125 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC19.71■□□□□ 0.75
USP6P35125 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP6P35125 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP6P35125 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
USP6P35125 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP6P35125 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP6P35125 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC19.71■□□□□ 0.75
USP6P35125 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP6P35125 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC19.71■□□□□ 0.75
USP6P35125 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC19.71■□□□□ 0.75
USP6P35125 RN7SL818P-201ENST00000485099 259 ntBASIC19.71■□□□□ 0.75
USP6P35125 MIR2392-201ENST00000584881 84 ntBASIC19.71■□□□□ 0.75
USP6P35125 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC19.71■□□□□ 0.75
USP6P35125 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC19.71■□□□□ 0.75
USP6P35125 RN7SL725P-201ENST00000606439 259 ntBASIC19.71■□□□□ 0.75
USP6P35125 AC006486.2-201ENST00000624246 2199 ntBASIC19.71■□□□□ 0.75
USP6P35125 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.71■□□□□ 0.75
USP6P35125 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP6P35125 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP6P35125 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
USP6P35125 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP6P35125 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP6P35125 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP6P35125 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC19.71■□□□□ 0.75
USP6P35125 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC19.71■□□□□ 0.75
USP6P35125 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP6P35125 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
USP6P35125 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC19.71■□□□□ 0.75
USP6P35125 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
USP6P35125 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC19.71■□□□□ 0.74
USP6P35125 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP6P35125 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP6P35125 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
USP6P35125 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP6P35125 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP6P35125 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP6P35125 AL354861.1-201ENST00000445213 355 ntBASIC19.7■□□□□ 0.74
USP6P35125 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC19.7■□□□□ 0.74
USP6P35125 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP6P35125 AC138701.2-201ENST00000553634 226 ntBASIC19.7■□□□□ 0.74
USP6P35125 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP6P35125 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP6P35125 AC007952.4-201ENST00000573866 637 ntBASIC19.7■□□□□ 0.74
USP6P35125 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC19.7■□□□□ 0.74
USP6P35125 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC19.7■□□□□ 0.74
USP6P35125 AL132780.4-201ENST00000624870 1135 ntBASIC19.7■□□□□ 0.74
USP6P35125 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
USP6P35125 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms