Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
CFTRP13569 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CFTRP13569 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CFTRP13569 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CFTRP13569 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC24.66■■□□□ 1.54
CFTRP13569 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CFTRP13569 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC24.66■■□□□ 1.54
CFTRP13569 KRT18P62-201ENST00000446618 1287 ntBASIC24.66■■□□□ 1.54
CFTRP13569 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC24.66■■□□□ 1.54
CFTRP13569 EMC4-208ENST00000559078 599 ntTSL 3 BASIC24.66■■□□□ 1.54
CFTRP13569 CES1P2-201ENST00000566467 1242 ntBASIC24.66■■□□□ 1.54
CFTRP13569 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC24.66■■□□□ 1.54
CFTRP13569 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC24.66■■□□□ 1.54
CFTRP13569 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC24.66■■□□□ 1.54
CFTRP13569 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC24.66■■□□□ 1.54
CFTRP13569 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC24.66■■□□□ 1.54
CFTRP13569 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CFTRP13569 RNF165-205ENST00000588679 2904 ntBASIC24.66■■□□□ 1.54
CFTRP13569 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
CFTRP13569 AC015688.4-201ENST00000580780 1647 ntBASIC24.66■■□□□ 1.54
CFTRP13569 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC24.66■■□□□ 1.54
CFTRP13569 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CFTRP13569 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CFTRP13569 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CFTRP13569 AL365181.1-201ENST00000564032 1828 ntBASIC24.66■■□□□ 1.54
CFTRP13569 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CFTRP13569 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
CFTRP13569 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CFTRP13569 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC24.65■■□□□ 1.54
CFTRP13569 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC24.65■■□□□ 1.54
CFTRP13569 CTSL-202ENST00000342020 933 ntTSL 2 BASIC24.65■■□□□ 1.54
CFTRP13569 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC24.65■■□□□ 1.54
CFTRP13569 OR7E115P-201ENST00000382617 1024 ntBASIC24.65■■□□□ 1.54
CFTRP13569 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
CFTRP13569 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC24.65■■□□□ 1.54
CFTRP13569 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC24.65■■□□□ 1.54
CFTRP13569 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC24.65■■□□□ 1.54
CFTRP13569 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC24.65■■□□□ 1.54
CFTRP13569 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC24.65■■□□□ 1.54
CFTRP13569 AC104506.1-201ENST00000609247 429 ntBASIC24.65■■□□□ 1.54
CFTRP13569 AC011462.4-201ENST00000616866 449 ntBASIC24.65■■□□□ 1.54
CFTRP13569 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC24.65■■□□□ 1.54
CFTRP13569 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CFTRP13569 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CFTRP13569 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CFTRP13569 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC24.65■■□□□ 1.54
CFTRP13569 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CFTRP13569 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC24.65■■□□□ 1.54
CFTRP13569 CCT8L1P-201ENST00000465400 1674 ntBASIC24.65■■□□□ 1.54
CFTRP13569 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC24.65■■□□□ 1.54
CFTRP13569 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
CFTRP13569 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC24.65■■□□□ 1.54
CFTRP13569 AIRN-201ENST00000601203 4374 ntBASIC24.65■■□□□ 1.54
CFTRP13569 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC24.65■■□□□ 1.54
CFTRP13569 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC24.65■■□□□ 1.54
CFTRP13569 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CFTRP13569 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CFTRP13569 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
CFTRP13569 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC24.64■■□□□ 1.54
CFTRP13569 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CFTRP13569 ASS1P2-201ENST00000439895 1223 ntBASIC24.64■■□□□ 1.54
CFTRP13569 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC24.64■■□□□ 1.54
CFTRP13569 STK24P1-201ENST00000455035 1291 ntBASIC24.64■■□□□ 1.54
CFTRP13569 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC24.64■■□□□ 1.54
CFTRP13569 MAX-218ENST00000557746 571 ntTSL 4 BASIC24.64■■□□□ 1.54
CFTRP13569 HNRNPA1P5-201ENST00000558213 966 ntBASIC24.64■■□□□ 1.54
CFTRP13569 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
CFTRP13569 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC24.64■■□□□ 1.54
CFTRP13569 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC24.64■■□□□ 1.54
CFTRP13569 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
CFTRP13569 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC24.64■■□□□ 1.54
CFTRP13569 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
CFTRP13569 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC24.64■■□□□ 1.53
CFTRP13569 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CFTRP13569 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
CFTRP13569 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC24.64■■□□□ 1.53
CFTRP13569 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.53
CFTRP13569 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC24.64■■□□□ 1.53
CFTRP13569 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CFTRP13569 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
CFTRP13569 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC24.64■■□□□ 1.53
CFTRP13569 VENTXP4-201ENST00000449029 958 ntBASIC24.64■■□□□ 1.53
CFTRP13569 RN7SL455P-201ENST00000580629 282 ntBASIC24.64■■□□□ 1.53
CFTRP13569 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC24.64■■□□□ 1.53
CFTRP13569 AC005274.1-201ENST00000623460 802 ntBASIC24.64■■□□□ 1.53
CFTRP13569 SF1-209ENST00000433274 2317 ntTSL 2 BASIC24.64■■□□□ 1.53
CFTRP13569 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC24.63■■□□□ 1.53
CFTRP13569 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC24.63■■□□□ 1.53
CFTRP13569 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC24.63■■□□□ 1.53
CFTRP13569 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC24.63■■□□□ 1.53
CFTRP13569 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
CFTRP13569 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
CFTRP13569 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
CFTRP13569 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
CFTRP13569 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
CFTRP13569 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CFTRP13569 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC24.63■■□□□ 1.53
CFTRP13569 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
CFTRP13569 GALP-202ENST00000440823 889 ntTSL 5 BASIC24.63■■□□□ 1.53
CFTRP13569 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms