Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND3P03897 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
MT-ND3P03897 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND3P03897 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
MT-ND3P03897 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND3P03897 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
MT-ND3P03897 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.32■□□□□ 0.04
MT-ND3P03897 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND3P03897 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND3P03897 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND3P03897 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.32■□□□□ 0.04
MT-ND3P03897 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND3P03897 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND3P03897 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.32■□□□□ 0.04
MT-ND3P03897 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND3P03897 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.32■□□□□ 0.04
MT-ND3P03897 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.32■□□□□ 0.04
MT-ND3P03897 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.32■□□□□ 0.04
MT-ND3P03897 MEP1AP4-201ENST00000423244 1087 ntBASIC15.32■□□□□ 0.04
MT-ND3P03897 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.32■□□□□ 0.04
MT-ND3P03897 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.32■□□□□ 0.04
MT-ND3P03897 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.32■□□□□ 0.04
MT-ND3P03897 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
MT-ND3P03897 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.32■□□□□ 0.04
MT-ND3P03897 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND3P03897 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.32■□□□□ 0.04
MT-ND3P03897 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.32■□□□□ 0.04
MT-ND3P03897 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.32■□□□□ 0.04
MT-ND3P03897 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.32■□□□□ 0.04
MT-ND3P03897 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.32■□□□□ 0.04
MT-ND3P03897 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.32■□□□□ 0.04
MT-ND3P03897 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.32■□□□□ 0.04
MT-ND3P03897 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.32■□□□□ 0.04
MT-ND3P03897 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
MT-ND3P03897 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND3P03897 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND3P03897 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
MT-ND3P03897 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
MT-ND3P03897 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.32■□□□□ 0.04
MT-ND3P03897 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND3P03897 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND3P03897 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
MT-ND3P03897 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.32■□□□□ 0.04
MT-ND3P03897 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND3P03897 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC15.32■□□□□ 0.04
MT-ND3P03897 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND3P03897 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.32■□□□□ 0.04
MT-ND3P03897 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND3P03897 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.32■□□□□ 0.04
MT-ND3P03897 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND3P03897 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND3P03897 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.32■□□□□ 0.04
MT-ND3P03897 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND3P03897 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND3P03897 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND3P03897 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND3P03897 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND3P03897 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
MT-ND3P03897 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ND3P03897 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ND3P03897 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ND3P03897 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ND3P03897 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
MT-ND3P03897 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.31■□□□□ 0.04
MT-ND3P03897 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.31■□□□□ 0.04
MT-ND3P03897 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ND3P03897 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ND3P03897 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ND3P03897 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.31■□□□□ 0.04
MT-ND3P03897 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ND3P03897 COX5BP8-201ENST00000416911 349 ntBASIC15.31■□□□□ 0.04
MT-ND3P03897 DOC2GP-202ENST00000514950 1163 ntBASIC15.31■□□□□ 0.04
MT-ND3P03897 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.31■□□□□ 0.04
MT-ND3P03897 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.31■□□□□ 0.04
MT-ND3P03897 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.31■□□□□ 0.04
MT-ND3P03897 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.31■□□□□ 0.04
MT-ND3P03897 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ND3P03897 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ND3P03897 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
MT-ND3P03897 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
MT-ND3P03897 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ND3P03897 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
MT-ND3P03897 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ND3P03897 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ND3P03897 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ND3P03897 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
MT-ND3P03897 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ND3P03897 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ND3P03897 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ND3P03897 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ND3P03897 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
MT-ND3P03897 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ND3P03897 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ND3P03897 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ND3P03897 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ND3P03897 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
MT-ND3P03897 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND3P03897 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND3P03897 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND3P03897 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 244.3 ms