Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AQP7P3-201ENST00000624547 1041 ntBASIC13.49□□□□□ -0.25
SPTA1P02549 CMC2-224ENST00000630396 481 ntTSL 5 BASIC13.49□□□□□ -0.25
SPTA1P02549 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.49□□□□□ -0.25
SPTA1P02549 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.49□□□□□ -0.25
SPTA1P02549 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SPTA1P02549 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SPTA1P02549 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.48□□□□□ -0.25
SPTA1P02549 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SPTA1P02549 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SPTA1P02549 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.48□□□□□ -0.25
SPTA1P02549 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
SPTA1P02549 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SPTA1P02549 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SPTA1P02549 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
SPTA1P02549 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SPTA1P02549 REXO1L2P-201ENST00000425429 2069 ntBASIC13.48□□□□□ -0.25
SPTA1P02549 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SPTA1P02549 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
SPTA1P02549 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.48□□□□□ -0.25
SPTA1P02549 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC13.48□□□□□ -0.25
SPTA1P02549 AP000358.1-201ENST00000456260 156 ntBASIC13.48□□□□□ -0.25
SPTA1P02549 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SPTA1P02549 PMEL-214ENST00000550447 901 ntTSL 3 BASIC13.48□□□□□ -0.25
SPTA1P02549 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC13.48□□□□□ -0.25
SPTA1P02549 NAMA-206ENST00000605377 509 ntTSL 5 BASIC13.48□□□□□ -0.25
SPTA1P02549 TP53-221ENST00000615910 1149 ntTSL 5 BASIC13.48□□□□□ -0.25
SPTA1P02549 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SPTA1P02549 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SPTA1P02549 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SPTA1P02549 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.48□□□□□ -0.25
SPTA1P02549 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SPTA1P02549 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC13.48□□□□□ -0.25
SPTA1P02549 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.48□□□□□ -0.25
SPTA1P02549 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SPTA1P02549 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SPTA1P02549 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SPTA1P02549 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SPTA1P02549 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SPTA1P02549 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC13.48□□□□□ -0.25
SPTA1P02549 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC13.48□□□□□ -0.25
SPTA1P02549 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SPTA1P02549 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SPTA1P02549 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SPTA1P02549 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SPTA1P02549 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.48□□□□□ -0.25
SPTA1P02549 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
SPTA1P02549 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC13.48□□□□□ -0.25
SPTA1P02549 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC13.48□□□□□ -0.25
SPTA1P02549 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC13.48□□□□□ -0.25
SPTA1P02549 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
SPTA1P02549 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
SPTA1P02549 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.48□□□□□ -0.25
SPTA1P02549 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC13.48□□□□□ -0.25
SPTA1P02549 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC13.48□□□□□ -0.25
SPTA1P02549 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC13.48□□□□□ -0.25
SPTA1P02549 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC13.48□□□□□ -0.25
SPTA1P02549 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC13.48□□□□□ -0.25
SPTA1P02549 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC13.48□□□□□ -0.25
SPTA1P02549 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
SPTA1P02549 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC13.48□□□□□ -0.25
SPTA1P02549 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC13.48□□□□□ -0.25
SPTA1P02549 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SPTA1P02549 AC004554.1-201ENST00000422830 1468 ntBASIC13.48□□□□□ -0.25
SPTA1P02549 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SPTA1P02549 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
SPTA1P02549 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SPTA1P02549 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SPTA1P02549 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SPTA1P02549 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SPTA1P02549 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
SPTA1P02549 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SPTA1P02549 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SPTA1P02549 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.47□□□□□ -0.25
SPTA1P02549 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.47□□□□□ -0.25
SPTA1P02549 AL360270.3-201ENST00000609118 1348 ntBASIC13.47□□□□□ -0.25
SPTA1P02549 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
SPTA1P02549 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
SPTA1P02549 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SPTA1P02549 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
SPTA1P02549 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
SPTA1P02549 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SPTA1P02549 FAM90A21P-201ENST00000510875 1396 ntBASIC13.47□□□□□ -0.25
SPTA1P02549 FAM90A15P-201ENST00000514465 1395 ntBASIC13.47□□□□□ -0.25
SPTA1P02549 FAM90A6P-201ENST00000515148 1394 ntBASIC13.47□□□□□ -0.25
SPTA1P02549 FAM90A16P-201ENST00000526662 1395 ntBASIC13.47□□□□□ -0.25
SPTA1P02549 FAM90A9P-201ENST00000527940 1395 ntBASIC13.47□□□□□ -0.25
SPTA1P02549 FAM90A5P-201ENST00000528738 1395 ntBASIC13.47□□□□□ -0.25
SPTA1P02549 FAM90A14P-201ENST00000530386 1395 ntBASIC13.47□□□□□ -0.25
SPTA1P02549 FAM90A13P-201ENST00000534703 1395 ntBASIC13.47□□□□□ -0.25
SPTA1P02549 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SPTA1P02549 Z69890.1-201ENST00000382990 339 ntBASIC13.47□□□□□ -0.25
SPTA1P02549 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SPTA1P02549 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SPTA1P02549 AC026434.2-201ENST00000506094 1078 ntBASIC13.47□□□□□ -0.25
SPTA1P02549 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SPTA1P02549 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
SPTA1P02549 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SPTA1P02549 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.47□□□□□ -0.25
SPTA1P02549 AP005212.2-201ENST00000584979 510 ntBASIC13.47□□□□□ -0.25
SPTA1P02549 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms