Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC14.77□□□□□ -0.05
PDGFBP01127 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC14.77□□□□□ -0.05
PDGFBP01127 NAV1-210ENST00000593583 726 ntBASIC14.77□□□□□ -0.05
PDGFBP01127 AC006483.2-201ENST00000609813 515 ntBASIC14.77□□□□□ -0.05
PDGFBP01127 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PDGFBP01127 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PDGFBP01127 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.77□□□□□ -0.05
PDGFBP01127 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.77□□□□□ -0.05
PDGFBP01127 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
PDGFBP01127 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PDGFBP01127 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.05
PDGFBP01127 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
PDGFBP01127 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PDGFBP01127 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.77□□□□□ -0.05
PDGFBP01127 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.77□□□□□ -0.05
PDGFBP01127 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PDGFBP01127 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
PDGFBP01127 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PDGFBP01127 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PDGFBP01127 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFBP01127 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFBP01127 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFBP01127 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.76□□□□□ -0.05
PDGFBP01127 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.76□□□□□ -0.05
PDGFBP01127 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFBP01127 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
PDGFBP01127 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
PDGFBP01127 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFBP01127 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFBP01127 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.76□□□□□ -0.05
PDGFBP01127 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.76□□□□□ -0.05
PDGFBP01127 AC011270.2-201ENST00000624293 2550 ntBASIC14.76□□□□□ -0.05
PDGFBP01127 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFBP01127 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFBP01127 CTSL-202ENST00000342020 933 ntTSL 2 BASIC14.76□□□□□ -0.05
PDGFBP01127 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
PDGFBP01127 CELP-201ENST00000411440 1249 ntTSL 5 BASIC14.76□□□□□ -0.05
PDGFBP01127 TLE1P1-201ENST00000422965 589 ntBASIC14.76□□□□□ -0.05
PDGFBP01127 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.76□□□□□ -0.05
PDGFBP01127 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC14.76□□□□□ -0.05
PDGFBP01127 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFBP01127 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC14.76□□□□□ -0.05
PDGFBP01127 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.76□□□□□ -0.05
PDGFBP01127 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFBP01127 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFBP01127 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
PDGFBP01127 CYP4F36P-201ENST00000589193 186 ntBASIC14.76□□□□□ -0.05
PDGFBP01127 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
PDGFBP01127 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC14.76□□□□□ -0.05
PDGFBP01127 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFBP01127 MIR6746-201ENST00000620971 63 ntBASIC14.76□□□□□ -0.05
PDGFBP01127 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC14.76□□□□□ -0.05
PDGFBP01127 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
PDGFBP01127 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFBP01127 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.76□□□□□ -0.05
PDGFBP01127 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFBP01127 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.76□□□□□ -0.05
PDGFBP01127 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFBP01127 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFBP01127 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.76□□□□□ -0.05
PDGFBP01127 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFBP01127 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
PDGFBP01127 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFBP01127 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.76□□□□□ -0.05
PDGFBP01127 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.76□□□□□ -0.05
PDGFBP01127 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
PDGFBP01127 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFBP01127 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.75□□□□□ -0.05
PDGFBP01127 AC023090.2-201ENST00000625182 2110 ntBASIC14.75□□□□□ -0.05
PDGFBP01127 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFBP01127 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.75□□□□□ -0.05
PDGFBP01127 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.75□□□□□ -0.05
PDGFBP01127 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
PDGFBP01127 AL513523.2-202ENST00000427283 2040 ntBASIC14.75□□□□□ -0.05
PDGFBP01127 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.75□□□□□ -0.05
PDGFBP01127 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFBP01127 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFBP01127 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFBP01127 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PDGFBP01127 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFBP01127 MIR645-201ENST00000385283 94 ntBASIC14.75□□□□□ -0.05
PDGFBP01127 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PDGFBP01127 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC14.75□□□□□ -0.05
PDGFBP01127 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC14.75□□□□□ -0.05
PDGFBP01127 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC14.75□□□□□ -0.05
PDGFBP01127 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PDGFBP01127 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC14.75□□□□□ -0.05
PDGFBP01127 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC14.75□□□□□ -0.05
PDGFBP01127 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.75□□□□□ -0.05
PDGFBP01127 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.75□□□□□ -0.05
PDGFBP01127 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC14.75□□□□□ -0.05
PDGFBP01127 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC14.75□□□□□ -0.05
PDGFBP01127 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.75□□□□□ -0.05
PDGFBP01127 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PDGFBP01127 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.75□□□□□ -0.05
PDGFBP01127 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFBP01127 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFBP01127 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
PDGFBP01127 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFBP01127 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms