Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC24.77■■□□□ 1.56
CUX2O14529 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC24.77■■□□□ 1.56
CUX2O14529 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC24.77■■□□□ 1.56
CUX2O14529 MIR4746-201ENST00000579802 71 ntBASIC24.77■■□□□ 1.56
CUX2O14529 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.56
CUX2O14529 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CUX2O14529 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CUX2O14529 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC24.76■■□□□ 1.55
CUX2O14529 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
CUX2O14529 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
CUX2O14529 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CUX2O14529 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC24.76■■□□□ 1.55
CUX2O14529 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CUX2O14529 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CUX2O14529 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CUX2O14529 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC24.76■■□□□ 1.55
CUX2O14529 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC24.76■■□□□ 1.55
CUX2O14529 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
CUX2O14529 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CUX2O14529 AC026884.1-201ENST00000418296 457 ntBASIC24.76■■□□□ 1.55
CUX2O14529 AC025186.1-201ENST00000478174 870 ntBASIC24.76■■□□□ 1.55
CUX2O14529 ABCC6P2-201ENST00000526069 590 ntBASIC24.76■■□□□ 1.55
CUX2O14529 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC24.76■■□□□ 1.55
CUX2O14529 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC24.76■■□□□ 1.55
CUX2O14529 RN7SL524P-201ENST00000581152 300 ntBASIC24.76■■□□□ 1.55
CUX2O14529 AC016582.2-202ENST00000587765 1094 ntBASIC24.76■■□□□ 1.55
CUX2O14529 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC24.76■■□□□ 1.55
CUX2O14529 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
CUX2O14529 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CUX2O14529 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC24.75■■□□□ 1.55
CUX2O14529 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC24.75■■□□□ 1.55
CUX2O14529 API5-202ENST00000420461 2009 ntTSL 2 BASIC24.75■■□□□ 1.55
CUX2O14529 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC24.75■■□□□ 1.55
CUX2O14529 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC24.75■■□□□ 1.55
CUX2O14529 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC24.75■■□□□ 1.55
CUX2O14529 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CUX2O14529 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC24.75■■□□□ 1.55
CUX2O14529 FAS-202ENST00000352159 1722 ntTSL 5 BASIC24.75■■□□□ 1.55
CUX2O14529 ZBED1P1-201ENST00000502364 1930 ntBASIC24.75■■□□□ 1.55
CUX2O14529 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC24.75■■□□□ 1.55
CUX2O14529 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CUX2O14529 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
CUX2O14529 AC008494.1-201ENST00000497612 796 ntBASIC24.75■■□□□ 1.55
CUX2O14529 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC24.75■■□□□ 1.55
CUX2O14529 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC24.75■■□□□ 1.55
CUX2O14529 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC24.75■■□□□ 1.55
CUX2O14529 AC112220.4-201ENST00000604982 1263 ntBASIC24.75■■□□□ 1.55
CUX2O14529 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC24.75■■□□□ 1.55
CUX2O14529 AC139713.2-207ENST00000641556 1292 ntBASIC24.75■■□□□ 1.55
CUX2O14529 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CUX2O14529 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC24.75■■□□□ 1.55
CUX2O14529 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
CUX2O14529 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
CUX2O14529 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC24.75■■□□□ 1.55
CUX2O14529 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CUX2O14529 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CUX2O14529 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
CUX2O14529 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC24.75■■□□□ 1.55
CUX2O14529 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
CUX2O14529 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC24.74■■□□□ 1.55
CUX2O14529 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CUX2O14529 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CUX2O14529 AC007292.2-201ENST00000593524 1812 ntBASIC24.74■■□□□ 1.55
CUX2O14529 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CUX2O14529 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CUX2O14529 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC24.74■■□□□ 1.55
CUX2O14529 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CUX2O14529 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CUX2O14529 AC022080.1-201ENST00000366255 781 ntBASIC24.74■■□□□ 1.55
CUX2O14529 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
CUX2O14529 AL954722.1-201ENST00000431238 259 ntBASIC24.74■■□□□ 1.55
CUX2O14529 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC24.74■■□□□ 1.55
CUX2O14529 AP001462.1-201ENST00000594089 452 ntBASIC24.74■■□□□ 1.55
CUX2O14529 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC24.74■■□□□ 1.55
CUX2O14529 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC24.74■■□□□ 1.55
CUX2O14529 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC24.74■■□□□ 1.55
CUX2O14529 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CUX2O14529 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CUX2O14529 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC24.74■■□□□ 1.55
CUX2O14529 MSANTD2P1-201ENST00000445341 1368 ntBASIC24.74■■□□□ 1.55
CUX2O14529 AP003680.1-201ENST00000598970 3660 ntBASIC24.74■■□□□ 1.55
CUX2O14529 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
CUX2O14529 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC24.73■■□□□ 1.55
CUX2O14529 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC24.73■■□□□ 1.55
CUX2O14529 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CUX2O14529 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
CUX2O14529 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CUX2O14529 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
CUX2O14529 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC24.73■■□□□ 1.55
CUX2O14529 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC24.73■■□□□ 1.55
CUX2O14529 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC24.73■■□□□ 1.55
CUX2O14529 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC24.73■■□□□ 1.55
CUX2O14529 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC24.73■■□□□ 1.55
CUX2O14529 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC24.73■■□□□ 1.55
CUX2O14529 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
CUX2O14529 AC025594.1-201ENST00000469533 543 ntBASIC24.73■■□□□ 1.55
CUX2O14529 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CUX2O14529 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC24.73■■□□□ 1.55
CUX2O14529 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC24.73■■□□□ 1.55
CUX2O14529 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC24.73■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms